PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_009613715.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | bZIP | ||||||||
Protein Properties | Length: 480aa MW: 53305.8 Da PI: 7.006 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 32.3 | 2.2e-10 | 203 | 243 | 4 | 41 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLee...kvkeLeae 41 k rr+++NReAAr+sR+RKka++++Le+ + ++Le+e XP_009613715.1 203 AKTLRRLAQNREAARKSRLRKKAYVQQLETsriRLAQLEQE 243 6889************************9733355555555 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.9E-5 | 200 | 267 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 6.8E-8 | 201 | 248 | No hit | No description |
PROSITE profile | PS50217 | 9.163 | 202 | 246 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 2.7E-7 | 203 | 243 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14708 | 9.87E-21 | 204 | 254 | No hit | No description |
SuperFamily | SSF57959 | 1.76E-6 | 204 | 246 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 207 | 222 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 4.5E-31 | 286 | 361 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 480 aa Download sequence Send to blast |
MESQRIGESG SLSAESGPSH HHHNMSYALF RGLNPPNTSF MYHSTPNNQE PPAFDFGELE 60 EAIVLQGVKM SNDEAAKASL YAATNRPAAT LEMFPSWPTR FHHTPRGSSK SGEESSDSGS 120 ALNTFSSRGE PHLEPESPVS GKPSSDYQSL EQNQQQIQIP QQQLQEMASD SPRTIVSHIE 180 PASKPNYEKR KGAGSTSDRV VDAKTLRRLA QNREAARKSR LRKKAYVQQL ETSRIRLAQL 240 EQELQRARSQ GLFMGGGAAA GANISSAGAA IFDMEYSRWL DDDQRHISEL RTALQAHLGD 300 GDLRIIVDGY IAHYDEIFLL KGVAAKSDVF HLITGMWTTP AERCFLWMGG FRPSELIKML 360 ITQLDPLTQQ QVVGIYSLQQ SSQQAEEALS QGLEQLQQSL IETVATGSLN DGMHHMAVAL 420 GKLANLEGFV RQADNLRQQT LHQLHRILTV RQAARCFLVI GEYYGRLRAL SSLWASRPRE |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Together with TGA10, basic leucine-zipper transcription factor required for anther development, probably via the activation of SPL expression in anthers and via the regulation of genes with functions in early and middle tapetal development (PubMed:20805327). Required for signaling responses to pathogen-associated molecular patterns (PAMPs) such as flg22 that involves chloroplastic reactive oxygen species (ROS) production and subsequent expression of H(2)O(2)-responsive genes (PubMed:27717447). {ECO:0000269|PubMed:20805327, ECO:0000269|PubMed:27717447}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by flg22 in leaves. {ECO:0000269|PubMed:27717447}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009613713.1 | 0.0 | PREDICTED: transcription factor TGA2.2-like isoform X1 | ||||
Refseq | XP_018629855.1 | 0.0 | PREDICTED: transcription factor TGA2.2-like isoform X1 | ||||
Swissprot | Q93XM6 | 0.0 | TGA9_ARATH; Transcription factor TGA9 | ||||
TrEMBL | A0A1J6IMX9 | 0.0 | A0A1J6IMX9_NICAT; Tgacg-sequence-specific dna-binding protein tga-2.1 | ||||
STRING | XP_009613713.1 | 0.0 | (Nicotiana tomentosiformis) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G08320.3 | 1e-162 | bZIP family protein |
Publications ? help Back to Top | |||
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