 |
Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_009612757.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
Family |
B3 |
Protein Properties |
Length: 225aa MW: 26188 Da PI: 9.4567 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_009612757.1 | genome | NCBI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 51.7 | 1.5e-16 | 130 | 219 | 1 | 98 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95
f+k +++s+v+ +l lp +f+++h k ++ +tl de+ ++e k+ k++ l++GW++F+ +++L +gD +vF+l+++++f +v
XP_009612757.1 130 FVKPMLQSHVTGGFWLGLPVHFCNTHLPK--RDEFVTLIDENEDEFETKYLALKRG----LSGGWRGFAIDHELVDGDALVFQLIESTKF--KVY 216
89*********************999423..4457***************666665....9***********************987777..888 PP
EE- CS
B3 96 vfr 98
++r
XP_009612757.1 217 IIR 219
877 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 225 aa
Download sequence Send
to blast |
MVESKKKMLA YEESRLKRLE ENKKRMEELN LSKLVQAVRT ATSPKPSPMK KVKPRVRQEV 60 DRSAVRRSNR VADKPPPNYK EVPIEPLGKP RSYKRRDLLN RVYADDEDRQ YAIERAEQLQ 120 SEIDADFPSF VKPMLQSHVT GGFWLGLPVH FCNTHLPKRD EFVTLIDENE DEFETKYLAL 180 KRGLSGGWRG FAIDHELVDG DALVFQLIES TKFKVYIIRV NQAED
|
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | HG975440 | 2e-49 | HG975440.1 Solanum pennellii chromosome ch01, complete genome. |