PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009611016.1
Organism
Nicotiana tomentosiformis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 318aa    MW: 37462.8 Da    PI: 5.4716
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009611016.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM122.44e-38221442128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknr..atksgyWkatgkdkevls 94 
                     p G+rF Ptd elv +yLkkkv+g++l+  + i+e+ i++++P++L  + +++e++wyfF+ r+++y++g+++nr  + k+gyWkatg d ev+ 
  XP_009611016.1  22 PIGYRFLPTDGELVEFYLKKKVNGETLPR-NRIREIYINQHHPQELC-NSQQRENSWYFFTGRKRRYKNGRKPNRqvIGKKGYWKATGVDSEVTY 114
                     89*************************99.77**************7.6677899********************633569************** PP

             NAM  95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128
                      +g+ vg k tL fy   +++g+k++W mheyrl
  XP_009611016.1 115 -NGQIVGYKMTLDFY---EQNGVKSQWKMHEYRL 144
                     .999***********...7999**********98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.18E-4219172IPR003441NAC domain
PROSITE profilePS5100542.06621173IPR003441NAC domain
PfamPF023654.2E-2222144IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    Send to blast
MEINRENYNQ ILSDEQFFES IPIGYRFLPT DGELVEFYLK KKVNGETLPR NRIREIYINQ  60
HHPQELCNSQ QRENSWYFFT GRKRRYKNGR KPNRQVIGKK GYWKATGVDS EVTYNGQIVG  120
YKMTLDFYEQ NGVKSQWKMH EYRLDRKSSL PDANSSIENQ ELDKYVLCEI YMNTKAKHIN  180
KRSKKENNSE DLTIEDDESM NSLNNDNIIQ DTDSTELNSY SSILSEINMY PYEAKMEHEN  240
SIGFKNNTEF GDQFIQEITP NFLASINHDQ PPILRERKML YAPDCPCNYD QISNFGDGNF  300
HCLQGFDELG VVIKHLFP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A8e-302117115166Stress-induced transcription factor NAC1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009611016.10.0PREDICTED: NAC transcription factor 29-like
TrEMBLA0A1S3YCC10.0A0A1S3YCC1_TOBAC; NAC transcription factor 29-like
STRINGXP_009611016.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1533968
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61110.16e-33NAC domain containing protein 25