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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_009610632.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | bZIP | ||||||||
Protein Properties | Length: 812aa MW: 86927 Da PI: 5.7097 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 40.8 | 4.8e-13 | 340 | 400 | 2 | 62 |
XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 ++ k+ r+++NRe+A+ sRqRKk ++eeLe+kv + + ++L +++ + e a+lk++ XP_009610632.1 340 EDEKKRARLIRNRESAQLSRQRKKHYVEELEDKVRIMHSTIQDLNAKISYIIAENATLKTQ 400 5678999*****************************************9999999999987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 6.6E-16 | 339 | 403 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.266 | 341 | 401 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.5E-11 | 342 | 400 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 4.5E-16 | 343 | 401 | No hit | No description |
SuperFamily | SSF57959 | 2.38E-12 | 343 | 401 | No hit | No description |
CDD | cd14704 | 3.42E-20 | 344 | 395 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0042538 | Biological Process | hyperosmotic salinity response | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005783 | Cellular Component | endoplasmic reticulum | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 812 aa Download sequence Send to blast |
MADPILADPP PSATENPTGE FDGLPIPPLD PTYFAQHMTA ADQGKINGFP MELPEDDEFM 60 LDDLDFDLSF DDIFLNNGDA VLSPDFLADC LGSDTDRVDP SCYGLPGNQL IGNFDNSSGE 120 EPPGSKFVPA DPNCFGQPGS QLVGDFDDSS RYFKSTSAEF CNFSGNQAAG GVMIMDTSSP 180 ELRQSSSGSD VLNATSSTSS HQVSGDVSGY LNVPSPESNG SNHEGSRESG NDNKGLGDAR 240 VLNCHSPESQ GSGNCGSNVS EGLNYPSDSN KSVHSSPNFG NNSIKNGVVE EKIKLEGVNA 300 NISNCSSLLK RKKSSEDSNN IGIHQKLTND GLIDNVNNDE DEKKRARLIR NRESAQLSRQ 360 RKKHYVEELE DKVRIMHSTI QDLNAKISYI IAENATLKTQ LGGAGVPSQV PPPPPGMYPH 420 HPVMYPWMPY TPPYMVKPQG SQVPLVPIPK LKPQGTAPAP KSSKKVEKNR TEVKTKKVAS 480 VSFLGLLFFM LLFGGLVPLL NVRYGGMREP FMSGDSFGSG SYEKHYGRVL AVDGPVNGTG 540 HSGKYSGKDY SSHCGRRGQD ESAQPKVNGS DPLAASLYVP RNDKLVKIDG NLIIHSVLAS 600 EKAMASHGGA DKNNRETGLA VPGDLAPAIA GSHPHLYRSP AVGQRALGTG EENGKSTVQQ 660 WFLEGVAGPL LSSGMCTEVF QFDVSSSAPG AVVPATNARN LSMEERQNAT HVHKVRNRRI 720 LNGPSVSLSR PSHNISEEQT GKQENLSGNK SLSSMVVSVL VDPREAGDGD VDGMMGPKSL 780 SRIFVVVLID SVKYVTYSCM LPFKGSVPLV TT |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 705 | 718 | RQNATHVHKVRNRR |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | X16450 | 0.0 | X16450.1 Tobacco mRNA for TGA1b DNA-binding protein. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009610632.1 | 0.0 | PREDICTED: bZIP transcription factor 17-like | ||||
TrEMBL | A0A1S3XSK6 | 0.0 | A0A1S3XSK6_TOBAC; bZIP transcription factor 17-like | ||||
STRING | XP_009610632.1 | 0.0 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA3029 | 24 | 50 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40950.1 | 1e-132 | bZIP family protein |