PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_009610161.1

Organism

Nicotiana tomentosiformis

Taxonomic ID

4098

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

bZIP

Protein Properties

Length: 416aa MW: 45821.3 Da PI: 8.6524

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_009610161.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	31.7	3.4e-10	268	325	5	62
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 kr++r NR +A rs +RK+ +i eLe kv++L++e ++L ++ l+k +l + XP_009610161.1 268 KRAKRILANRQSAARSKERKLRYISELEYKVQKLQTEATTLSTQVTILQKDFTELSNL 325 9********************************************9999998888765 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	3.0E-15	264	328	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.013	266	329	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	4.2E-11	268	324	No hit	No description
Pfam	PF00170	1.1E-9	268	323	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	3.09E-11	268	321	No hit	No description
CDD	cd14703	2.57E-20	269	320	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 416 aa Download sequence Send to blast
MEEVDVNCQV PKVVSNFARE NVFRGSDGLP PRKGHRRSNS DVPLGFSAMI QSSPQLMPIS 60 GQRISGRAVN LGDISGREKT IDLQKQPMGL SSNGRIDVEG IGERKSRGEV TDELLFSYMN 120 LENIEALNSS GTEDRDKGSM VSCTKVSGNE SSNNEAESLL KRNGVSSQPT SLREGIKRSA 180 DADIAPTTRH FRSLSMDSAI GSFHYGDESP KLPTYLVNHS GQLSPSNSGN ESSSQRNFDF 240 GNAEFSEAEM KKIMADERLA EIAVSDPKRA KRILANRQSA ARSKERKLRY ISELEYKVQK 300 LQTEATTLST QVTILQKDFT ELSNLNSELK FRVQAMEQQA QLRDALHEAL TSEVQRLKLA 360 AGELREEGRL PNGMTQQMPV KHNMFPMQRQ QPSQIQQLSV GKPTTASSAS ATPASA

Sequence ? help Back to Top

Protein Sequence Length: 416 aa Download sequence Send to blast

MEEVDVNCQV PKVVSNFARE NVFRGSDGLP PRKGHRRSNS DVPLGFSAMI QSSPQLMPIS  60
GQRISGRAVN LGDISGREKT IDLQKQPMGL SSNGRIDVEG IGERKSRGEV TDELLFSYMN  120
LENIEALNSS GTEDRDKGSM VSCTKVSGNE SSNNEAESLL KRNGVSSQPT SLREGIKRSA  180
DADIAPTTRH FRSLSMDSAI GSFHYGDESP KLPTYLVNHS GQLSPSNSGN ESSSQRNFDF  240
GNAEFSEAEM KKIMADERLA EIAVSDPKRA KRILANRQSA ARSKERKLRY ISELEYKVQK  300
LQTEATTLST QVTILQKDFT ELSNLNSELK FRVQAMEQQA QLRDALHEAL TSEVQRLKLA  360
AGELREEGRL PNGMTQQMPV KHNMFPMQRQ QPSQIQQLSV GKPTTASSAS ATPASA

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009610161.1	0.0	PREDICTED: transcription factor VIP1-like isoform X2
TrEMBL	A0A1S4BVW7	0.0	A0A1S4BVW7_TOBAC; transcription factor RF2a-like
STRING	XP_009610158.1	0.0	(Nicotiana tomentosiformis)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38900.3	2e-90	bZIP family protein