PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009610158.1
Organism
Nicotiana tomentosiformis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bZIP
Protein Properties Length: 475aa    MW: 51985.2 Da    PI: 8.7806
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009610158.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.54e-10327384562
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 
                     kr++r   NR +A rs +RK+ +i eLe kv++L++e ++L  ++  l+k   +l + 
  XP_009610158.1 327 KRAKRILANRQSAARSKERKLRYISELEYKVQKLQTEATTLSTQVTILQKDFTELSNL 384
                     9********************************************9999998888765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.0E-15323387IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.013325388IPR004827Basic-leucine zipper domain
PfamPF001701.4E-9327382IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1704.7E-11327383No hitNo description
SuperFamilySSF579593.59E-11327380No hitNo description
CDDcd147031.86E-20328379No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 475 aa     Download sequence    Send to blast
MAQSNSKPPM SHNFGVGASH VRSLSQPSNF LNNCLPPLSP LPPSESSMMS ANANLKDASM  60
EEVDVNCQVP KVVSNFAREN VFRGSDGLPP RKGHRRSNSD VPLGFSAMIQ SSPQLMPISG  120
QRISGRAVNL GDISGREKTI DLQKQPMGLS SNGRIDVEGI GERKSRGEVT DELLFSYMNL  180
ENIEALNSSG TEDRDKGSMV SCTKVSGNES SNNEAESLLK RNGVSSQPTS LREGIKRSAD  240
ADIAPTTRHF RSLSMDSAIG SFHYGDESPK LPTYLVNHSG QLSPSNSGNE SSSQRNFDFG  300
NAEFSEAEMK KIMADERLAE IAVSDPKRAK RILANRQSAA RSKERKLRYI SELEYKVQKL  360
QTEATTLSTQ VTILQKDFTE LSNLNSELKF RVQAMEQQAQ LRDALHEALT SEVQRLKLAA  420
GELREEGRLP NGMTQQMPVK HNMFPMQRQQ PSQIQQLSVG KPTTASSASA TPASA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009610158.10.0PREDICTED: transcription factor RF2a-like isoform X1
RefseqXP_009610159.10.0PREDICTED: transcription factor RF2a-like isoform X1
RefseqXP_009610160.10.0PREDICTED: transcription factor RF2a-like isoform X1
TrEMBLA0A1S4BVW70.0A0A1S4BVW7_TOBAC; transcription factor RF2a-like
STRINGXP_009610158.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12652478
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38900.31e-91bZIP family protein