PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009607151.1
Organism
Nicotiana tomentosiformis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 422aa    MW: 46741 Da    PI: 6.7072
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009607151.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM54.83.3e-1768354129
             NAM  54 eekewyfFskrdkkyatgkrknr..atksgyWkatgkdkevlskkgelvglkktLvfykgr.apkgektdWvmheyrle 129
                     + k+wyf s++++ky++g ++n   a ++gyW+  g+d  +++ +g+l+g +ktL +  g+ +++ ++t+W+mheyrle
  XP_009607151.1   6 QAKKWYFLSPASNKYTEGGQSNGvsANNDGYWEPCGTDSLIHK-DGKLIGYRKTLNYIAGKlDKDRKRTEWLMHEYRLE 83 
                     6789*************999998545679***********999.99************9862455679*********85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100526.2941104IPR003441NAC domain
PfamPF023651.5E-9482IPR003441NAC domain
SuperFamilySSF1019414.58E-196104IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 422 aa     Download sequence    Send to blast
MHHPSQAKKW YFLSPASNKY TEGGQSNGVS ANNDGYWEPC GTDSLIHKDG KLIGYRKTLN  60
YIAGKLDKDR KRTEWLMHEY RLEGSRDVPT SDDMQRVFCK LFKSNNKLMA AEEKEATKFA  120
APNDGVSGAD PTIQGPENAN DITNDKGPSN GHSRDLLPMP ETDQDTTMPT PTPQHVQGTT  180
LTRTGRQKAT NNVVRNKRPR RKRDSHPPPA SHQGLMMPHL PNANSQPQRD QGIRLPPPLP  240
QNDERKTLPI STGPYKANNG VVVTDNGPSN SLVVPCCPEY ILDEPSFDWT VANSWLQDGT  300
VLPSRPQHGQ QTILPSLTGN NTNADEVSVI GLTLNHLRDA QDLPSSVQLP KLPSVQASPR  360
GSHENEAAVA PRYDGWPLHT AETRLPPFDG PFESLTEEEL AFFDKPDPGY PEAFENKKEA  420
KK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A5e-14810671167NO APICAL MERISTEM PROTEIN
1ut4_B5e-14810671167NO APICAL MERISTEM PROTEIN
1ut7_A5e-14810671167NO APICAL MERISTEM PROTEIN
1ut7_B5e-14810671167NO APICAL MERISTEM PROTEIN
3swm_A5e-14810674170NAC domain-containing protein 19
3swm_B5e-14810674170NAC domain-containing protein 19
3swm_C5e-14810674170NAC domain-containing protein 19
3swm_D5e-14810674170NAC domain-containing protein 19
3swp_A5e-14810674170NAC domain-containing protein 19
3swp_B5e-14810674170NAC domain-containing protein 19
3swp_C5e-14810674170NAC domain-containing protein 19
3swp_D5e-14810674170NAC domain-containing protein 19
4dul_A5e-14810671167NAC domain-containing protein 19
4dul_B5e-14810671167NAC domain-containing protein 19
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1197201RPRRK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009607149.10.0PREDICTED: uncharacterized protein LOC104101418 isoform X1
RefseqXP_009607150.10.0PREDICTED: uncharacterized protein LOC104101418 isoform X1
TrEMBLA0A1S3Z2F10.0A0A1S3Z2F1_TOBAC; uncharacterized protein LOC107782254 isoform X1
STRINGXP_009607149.10.0(Nicotiana tomentosiformis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12977.14e-18NAC family protein