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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_009606805.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | NAC | ||||||||
Protein Properties | Length: 262aa MW: 30021.3 Da PI: 9.0785 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 141.8 | 4.1e-44 | 9 | 135 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.. 95 pGfrFhPt eel+++yLk+ +++kkl+ +vi+ v+iy ++Pw+Lp ++ +e+ewyfF++ ++k+ + ++nr+t++g+Wkatg+d ++ s+ XP_009606805.1 9 PGFRFHPTAEELINFYLKRIIKDKKLDS-NVIAFVNIYLHDPWELPGLARIGEREWYFFVPINRKHGPKGKPNRTTRNGFWKATGSDCQIRSTld 102 9*************************99.99***************8778899**************************************9988 PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++glkktLvfy grapkg +tdWvm+eyrl XP_009606805.1 103 PKKVIGLKKTLVFYVGRAPKGCRTDWVMNEYRL 135 8889***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 50.078 | 7 | 155 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 3.79E-52 | 8 | 155 | IPR003441 | NAC domain |
Pfam | PF02365 | 4.9E-24 | 9 | 135 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 262 aa Download sequence Send to blast |
MSLPELELPG FRFHPTAEEL INFYLKRIIK DKKLDSNVIA FVNIYLHDPW ELPGLARIGE 60 REWYFFVPIN RKHGPKGKPN RTTRNGFWKA TGSDCQIRST LDPKKVIGLK KTLVFYVGRA 120 PKGCRTDWVM NEYRLPDGHP LPKDHDIVLC KVYRKATSFK VLEQRAIVEE HAAKRHPTST 180 QSDDNLGPLF PQEDLESSAS HNLISFRSLQ EENHNTAIKL PQLSASNPFL EPPKFSIDSL 240 SSPLWTEIQS TGQDLWSLFS LS |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 9e-41 | 1 | 158 | 15 | 168 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 9e-41 | 1 | 158 | 15 | 168 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 9e-41 | 1 | 158 | 15 | 168 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 9e-41 | 1 | 158 | 15 | 168 | NO APICAL MERISTEM PROTEIN |
3swm_A | 9e-41 | 1 | 158 | 18 | 171 | NAC domain-containing protein 19 |
3swm_B | 9e-41 | 1 | 158 | 18 | 171 | NAC domain-containing protein 19 |
3swm_C | 9e-41 | 1 | 158 | 18 | 171 | NAC domain-containing protein 19 |
3swm_D | 9e-41 | 1 | 158 | 18 | 171 | NAC domain-containing protein 19 |
3swp_A | 9e-41 | 1 | 158 | 18 | 171 | NAC domain-containing protein 19 |
3swp_B | 9e-41 | 1 | 158 | 18 | 171 | NAC domain-containing protein 19 |
3swp_C | 9e-41 | 1 | 158 | 18 | 171 | NAC domain-containing protein 19 |
3swp_D | 9e-41 | 1 | 158 | 18 | 171 | NAC domain-containing protein 19 |
4dul_A | 9e-41 | 1 | 158 | 15 | 168 | NAC domain-containing protein 19 |
4dul_B | 9e-41 | 1 | 158 | 15 | 168 | NAC domain-containing protein 19 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269|PubMed:26834774}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269|PubMed:26834774}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009606805.1 | 0.0 | PREDICTED: NAC domain-containing protein 35-like isoform X2 | ||||
Swissprot | Q10S65 | 2e-77 | NAC22_ORYSJ; NAC domain-containing protein 22 | ||||
TrEMBL | A0A1S4D881 | 0.0 | A0A1S4D881_TOBAC; putative NAC domain-containing protein 94 isoform X2 | ||||
STRING | XP_009606805.1 | 0.0 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA3531 | 22 | 48 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G17040.1 | 2e-84 | NAC domain containing protein 36 |
Publications ? help Back to Top | |||
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