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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_009605872.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family |
GATA |
Protein Properties |
Length: 386aa MW: 42210.7 Da PI: 6.1371 |
Description |
GATA family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_009605872.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GATA | 57.9 | 1.4e-18 | 307 | 341 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
Cs+Cg+ kTp+WR gp g ktLCnaCG++y++ +l
XP_009605872.1 307 CSHCGVQKTPQWRAGPMGAKTLCNACGVRYKSGRL 341
*******************************9986 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0008270 | Molecular Function | zinc ion binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 386 aa
Download sequence Send
to blast |
MLYRTQHHSF FSPFNPFTFS SSLSPHPFPP SSSSSPSPLS HSPSDQGMDC VEGALKSSFM 60 SEAALKTTHQ QAYGDDLWAN GNGQNVVSGD DFFVDDLLDF SNGFVEEQGE EEKGEDNAVH 120 KICSVSVSVS PQKQLEDKEA EKENGTVFPP AKEDFDSLPG SELIVPADDL DSLEWLSHFV 180 EDSFSEYSLT YPAGKLPVKP VVNQLEDGEI PVQEKSCFTT PVQTKARTKR GRTSVRIWPV 240 GSGSLSESSS SSSSSSSTTS LSSSPSNWVL YQIPVHTAES PGKPLAKKPK RKPAVQGGNG 300 PQQPRRCSHC GVQKTPQWRA GPMGAKTLCN ACGVRYKSGR LLPEYRPACS PTFSTELHSN 360 NHRKVLEMRR KKEFEESGSD QPVQSF
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. May be involved in the regulation of some light-responsive genes (By similarity). {ECO:0000250}. |