 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
XP_009604989.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 315aa MW: 34898.4 Da PI: 8.3699 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_009604989.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 40.5 | 4.6e-13 | 140 | 202 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--........HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 2 rkRttftkeqleeLeelFeknryps........aeereeLAkklgLterqVkvWFqNrRakek 56
rk+ ++tkeq Lee F+++++++ ++++ LAk+l+L rqV vWFqNrRa+ k
XP_009604989.1 140 RKKLRLTKEQSAFLEESFKEHNTLNpeknfnilQKQKLALAKQLNLRPRQVEVWFQNRRARTK 202
788899*************7666651111111156788899********************98 PP
|
| 2 | HD-ZIP_I/II | 111 | 7.8e-36 | 140 | 238 | 1 | 92 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLepe........rKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeL 87
+kk+rl+keq+++LEesF+e+++L+pe +K +la++L+l+prqv+vWFqnrRARtk+kq+E d+e+Lkr++++l+een+rL+ke +eL
XP_009604989.1 140 RKKLRLTKEQSAFLEESFKEHNTLNPEknfnilqkQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTELDCEYLKRCCEKLTEENRRLQKELQEL 234
69***********************963333333368999******************************************************* PP
HD-ZIP_I/II 88 reelk 92
r +lk
XP_009604989.1 235 R-ALK 238
9.555 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 315 aa
Download sequence Send
to blast |
MELALSLGGD TQKPFSFLEK STNNSSSHEE LLTGSNKDIR FCMGLGKSNP NTAEPGLTNG 60
PERMVLDMNR RPIILAEEAE EGTDLSSPNS NSAVSSFQME FSSIYRSGIS RSLIGKRDHF 120
EAGNTERGVS DEDENNGLAR KKLRLTKEQS AFLEESFKEH NTLNPEKNFN ILQKQKLALA 180
KQLNLRPRQV EVWFQNRRAR TKLKQTELDC EYLKRCCEKL TEENRRLQKE LQELRALKSS 240
QPFYMQLPAT TLTMCPSCER VATTAATAVP TAAAATTTSA TATANAAATN TTLSLAKPNL 300
FPFPPAQIHP PQAAS
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 196 | 204 | RRARTKLKQ |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor. {ECO:0000250}. |
