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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_009604988.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family |
HD-ZIP |
Protein Properties |
Length: 316aa MW: 34981.5 Da PI: 8.3699 |
Description |
HD-ZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_009604988.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 40.5 | 4.6e-13 | 141 | 203 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--........HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 2 rkRttftkeqleeLeelFeknryps........aeereeLAkklgLterqVkvWFqNrRakek 56
rk+ ++tkeq Lee F+++++++ ++++ LAk+l+L rqV vWFqNrRa+ k
XP_009604988.1 141 RKKLRLTKEQSAFLEESFKEHNTLNpeknfnilQKQKLALAKQLNLRPRQVEVWFQNRRARTK 203
788899*************7666651111111156788899********************98 PP
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2 | HD-ZIP_I/II | 111.1 | 7.5e-36 | 141 | 239 | 1 | 92 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLepe........rKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeL 87
+kk+rl+keq+++LEesF+e+++L+pe +K +la++L+l+prqv+vWFqnrRARtk+kq+E d+e+Lkr++++l+een+rL+ke +eL
XP_009604988.1 141 RKKLRLTKEQSAFLEESFKEHNTLNPEknfnilqkQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTELDCEYLKRCCEKLTEENRRLQKELQEL 235
69***********************963333333368999******************************************************* PP
HD-ZIP_I/II 88 reelk 92
r +lk
XP_009604988.1 236 R-ALK 239
9.555 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 316 aa
Download sequence Send
to blast |
MELALSLGGD TQKPFSFLEK STNNSSSHEE LLTGSNKDIR FCMGLGKSNP NIAAEPGLTN 60 GPERMVLDMN RRPIILAEEA EEGTDLSSPN SNSAVSSFQM EFSSIYRSGI SRSLIGKRDH 120 FEAGNTERGV SDEDENNGLA RKKLRLTKEQ SAFLEESFKE HNTLNPEKNF NILQKQKLAL 180 AKQLNLRPRQ VEVWFQNRRA RTKLKQTELD CEYLKRCCEK LTEENRRLQK ELQELRALKS 240 SQPFYMQLPA TTLTMCPSCE RVATTAATAV PTAAAATTTS ATATANAAAT NTTLSLAKPN 300 LFPFPPAQIH PPQAAS
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 197 | 205 | RRARTKLKQ |
Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor. {ECO:0000250}. |