PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_009604126.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | Trihelix | ||||||||
Protein Properties | Length: 315aa MW: 35630.3 Da PI: 8.8372 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 51.8 | 2.2e-16 | 23 | 103 | 2 | 74 |
trihelix 2 WtkqevlaLiearremeerlrrgk........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtse 74 Wt qe+++Liea++ ++er +r++ + +W++v +++++ + rs++qC++kw+nl +++kk++e e++++++ XP_009604126.1 23 WTVQETMVLIEAKKMDDERRNRRQgdinergkPTELRWKWVEDYCWRNSCLRSQNQCNDKWDNLMRDFKKVREYERREAKK 103 **************999999975333334433999****************************************997544 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50090 | 7.097 | 15 | 87 | IPR017877 | Myb-like domain |
Pfam | PF13837 | 5.1E-12 | 22 | 102 | No hit | No description |
Sequence ? help Back to Top |
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Protein Sequence Length: 315 aa Download sequence Send to blast |
MDNILVGDQG GSSMLRDYRK GNWTVQETMV LIEAKKMDDE RRNRRQGDIN ERGKPTELRW 60 KWVEDYCWRN SCLRSQNQCN DKWDNLMRDF KKVREYERRE AKKAAEVGEE ITSYWKIEKN 120 ERKEKSLPTN MLPEIYEALV EIVDRKGQKM LPASLLPTLQ QQSTQPQITA LPLPPPPLPP 180 PTTAVVAQTA APQLSDVAYT GQYPFPTVDS PAKKRRMSGE GTSSGTAKGN INNSSQEVGS 240 AISKSAVIIA EAIQSCEERE EKRHRELLSL HERRLKIEES KAEINREGIN GLVDSINKLA 300 NSILALAGNK NQSAP |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009604126.1 | 0.0 | PREDICTED: trihelix transcription factor ASR3-like isoform X3 | ||||
TrEMBL | A0A1S3XZW3 | 0.0 | A0A1S3XZW3_TOBAC; uncharacterized protein LOC107770676 | ||||
STRING | XP_009604113.1 | 0.0 | (Nicotiana tomentosiformis) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G35640.1 | 3e-50 | Trihelix family protein |