 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
XP_009604043.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 340aa MW: 37574.5 Da PI: 8.6703 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_009604043.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 56.2 | 5.8e-18 | 184 | 238 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
rk+ ++tkeq Lee F+++++++ +++ LAk+l+L rqV vWFqNrRa+ k
XP_009604043.1 184 RKKLRLTKEQSAFLEESFKEHNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTK 238
788899***********************************************98 PP
|
| 2 | HD-ZIP_I/II | 127.5 | 5.7e-41 | 184 | 274 | 1 | 92 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92
+kk+rl+keq+++LEesF+e+++L+p++K +la++L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lk+++++l+een+rL+ke +eLr +lk
XP_009604043.1 184 RKKLRLTKEQSAFLEESFKEHNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKKCCETLTEENKRLQKELQELR-ALK 274
69*************************************************************************************9.555 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 340 aa
Download sequence Send
to blast |
MELALSLGGD TPKSFLFLEK SSSSSSLHEK LNSSKDLGFC MGLGKCNEDK IRKNKQRRSQ 60
DLKEDHESKG SSDPLLQLDL LPFSPVSRDT SSQLHFPWLT ENIAAEPGPA GKVLNMNRRQ 120
LVAEEAEEGA ALSSPNSAIS TFQVNIPIYR NGNMLLGKRE SEGDVERWGN SSSRASDEED 180
GSARKKLRLT KEQSAFLEES FKEHNTLNPK QKLALAKQLN LRPRQVEVWF QNRRARTKLK 240
QTEVDCEYLK KCCETLTEEN KRLQKELQEL RALKSSQPFY MQLPATTLTM CPSCERVVTA 300
TSSAAAASAA AAAANTTLTL AKPGPFPFSP AQVQAPQAAS
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 232 | 240 | RRARTKLKQ |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor. {ECO:0000250}. |
