PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009603686.1
Organism
Nicotiana tomentosiformis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bZIP
Protein Properties Length: 180aa    MW: 21151.5 Da    PI: 5.6827
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009603686.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_145.22e-1481132556
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 
                     +++rr+++NRe+ArrsR RK+  ++eL   v  L +eN++L ++l++ ++  
  XP_009603686.1  81 RKQRRMISNRESARRSRMRKQRHLDELWAQVVWLRNENHQLLDKLNHSSERQ 132
                     689******************************************9988765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003387.2E-1477141IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.25479142IPR004827Basic-leucine zipper domain
PfamPF001704.3E-1281134IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.8E-1181153No hitNo description
SuperFamilySSF579599.14E-1381130No hitNo description
CDDcd147024.92E-1782131No hitNo description
PROSITE patternPS0003608499IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042803Molecular Functionprotein homodimerization activity
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    Send to blast
MQPTDVTDFY RLLPSNSTQY PSQSCVNYNT STFQLNRLVN PLYHLQITPQ VQEFNPQLTC  60
FNSNSTSDEA DEQQLNLINE RKQRRMISNR ESARRSRMRK QRHLDELWAQ VVWLRNENHQ  120
LLDKLNHSSE RQDQVLEENA QLKKEASELR QMITDMQLSS PCPSLRALED EPCSGLSQNE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
193100RRSRMRKQ
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00389DAPTransfer from AT3G30530Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754410.0HG975441.1 Solanum pennellii chromosome ch02, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009603686.11e-130PREDICTED: basic leucine zipper 43-like
TrEMBLA0A314L2U21e-124A0A314L2U2_NICAT; Basic leucine zipper 43
STRINGXP_009603686.11e-129(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA9472492
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G30530.11e-51basic leucine-zipper 42