 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
XP_009603649.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
| Family |
Trihelix |
| Protein Properties |
Length: 335aa MW: 38180.1 Da PI: 5.8049 |
| Description |
Trihelix family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_009603649.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | trihelix | 28.2 | 5e-09 | 18 | 85 | 2 | 69 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegek 69
Wt +e l+L++ ++++ + +++ + ++W++ +++ + g++rs +qCk +we + y k+k +e
XP_009603649.1 18 WTLHESLTLVNEMKSTQIECGNTLASFQKWQSTVQNCNSLGVNRSLNQCKRRWEFMLENYNKVKPWET 85
****************************************************************9986 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 335 aa
Download sequence Send
to blast |
MEKSGGSLRT RSQVAPDWTL HESLTLVNEM KSTQIECGNT LASFQKWQST VQNCNSLGVN 60
RSLNQCKRRW EFMLENYNKV KPWETAYWTT SFDRDRKSEL GLPEDFDFEL FSAIGRYLSL 120
LQGEDGGGAE TDPDSDPEAQ QAQGNNSFLE IGLKRQRQRT KPRKFKMEER LNPWRRILNE 180
NRKYEQSMVG IKHEASVDAK LEAPGHEKSS LPIKRETSSP EEKVELPSLS LVNTVKAEQI 240
NVDNPEEMMA ATLRESAELI TAIIEGSPMD DRDCRLADLK NFEAGRVHLI RSQGNQLIEC 300
LGKISDTLSQ LCDSIHKKIT NFNSLAFSIM VRFVM
|
| Best hit in Arabidopsis thaliana ? help
Back to Top |
| Hit ID |
E-value |
Description |
| AT4G31270.1 | 1e-49 | sequence-specific DNA binding transcription factors |
