PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009602803.1
Organism
Nicotiana tomentosiformis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bZIP
Protein Properties Length: 370aa    MW: 42147.8 Da    PI: 9.6391
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009602803.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_124.65.6e-082412871763
                     HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1  17 ArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                     A+rsR RK+++i+eLe+ v++L+ae ++   ele l+++   l +e+
  XP_009602803.1 241 AQRSRVRKLQYIAELERNVQVLQAESSEVSAELEFLNQQNLILNMEN 287
                     89************************************998888877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003388.1E-4230289IPR004827Basic-leucine zipper domain
CDDcd147031.27E-15232280No hitNo description
SuperFamilySSF579595.55E-6241283No hitNo description
Gene3DG3DSA:1.20.5.1701.0E-7241283No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 370 aa     Download sequence    Send to blast
MANTKGPSSM RSMMYNGKCS LLPPKSPFPS MAPSYLDYVP SSAVNQKGIL KPRDGNSHHQ  60
RTSSESCLIE EQPSWLDDLL NEPETPVRRG SHRRSSSDSF AYFDAANIAR LDYIAQVDNK  120
FGNMTRIPSW GSQDFDYYKD ARHAVSYVDQ NSSVRRKNRT KDASSNTVLH LRNLSFPRED  180
LRIQSSVSPC LPQDGDRPKS AGSDKQDLAE SGKGSAEKKD SSQSKSSSSE TDTKRAKQQF  240
AQRSRVRKLQ YIAELERNVQ VLQAESSEVS AELEFLNQQN LILNMENKAL KQRLENLAQE  300
QLIKYLEHEV LERERGRLRA LYQQQQQQQP QQLSSSHRRN TSRDLDQQFA NLSLRQKEAN  360
RDPVSGQLHI
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0133190.0BT013319.1 Lycopersicon esculentum clone 135006R, mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009602803.10.0PREDICTED: uncharacterized protein At4g06598
RefseqXP_009602804.10.0PREDICTED: uncharacterized protein At4g06598
RefseqXP_009602805.10.0PREDICTED: uncharacterized protein At4g06598
TrEMBLA0A1U7WFP50.0A0A1U7WFP5_NICSY; uncharacterized protein At4g06598
STRINGXP_009602803.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA27651733
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G58110.27e-85bZIP family protein