 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
XP_009601871.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
| Family |
WRKY |
| Protein Properties |
Length: 285aa MW: 33136.9 Da PI: 6.2918 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_009601871.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 71.8 | 9e-23 | 124 | 185 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59
++Dg++WrKYGqK++ +s++pr Y+rCt++ +C++ k+v+ +e+p + ++tY g+H+++
XP_009601871.1 124 VEDGCAWRKYGQKNILNSKYPRCYFRCTHKhdqDCRAAKQVQIIQENPIIYHTTYFGQHTCN 185
58***************************99999**************************97 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 285 aa
Download sequence Send
to blast |
MEKPLVHQNP RKIRVMKELV EGKRFATQLQ TLFQQPIADH GSVSADELLL KIWRSFSEAI 60
TELNTWGLAF QIEEVDQADS EDRKSKDSTS ELKKKKDKQG GKDRRGCYKR RKTSASWMRE 120
SATVEDGCAW RKYGQKNILN SKYPRCYFRC THKHDQDCRA AKQVQIIQEN PIIYHTTYFG 180
QHTCNSVKIP KHEMESPSFE VKQLLPSSDT IDNSHDSTVN KEEDQEIKVQ SDVSSSTMDS 240
NLWQDFAHDS IMADHSSYFE RVISSDMEDF DKFSDFHFDE AIEFS
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 93 | 111 | KKKDKQGGKDRRGCYKRRK |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor involved in senescence, biotic and abiotic stress responses by modulating various phytohormones signaling pathways (By similarity). Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). Required for the resistance (R) gene Mi-1-mediated resistance to potato aphid (e.g. M.euphorbiae) and root-knot nematode (e.g. M.javanica) (PubMed:21898085). {ECO:0000250|UniProtKB:Q9LY00, ECO:0000250|UniProtKB:Q9SUP6, ECO:0000269|PubMed:21898085}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced in response to potato aphid (e.g. M.euphorbiae) infestation and root-knot nematode (e.g. M.javanica) inoculation. Up-regulated by salicylic acid (SA) and suppressed by methyl jasmonate (MeJA). {ECO:0000269|PubMed:21898085}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AF193770 | 0.0 | AF193770.1 Nicotiana tabacum DNA-binding protein 3 (WRKY3) mRNA, complete cds. |
