PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009601217.1
Organism
Nicotiana tomentosiformis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 274aa    MW: 31844.8 Da    PI: 5.7326
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009601217.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM76.75.4e-24111423128
             NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykv.ePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 
                     +G rFhPtd e++ +yL   v++++l+l++  ++ vd+y   ePw++ +      +++++  yf ++++k+++t kr +r++ +g+Wk + k ++
  XP_009601217.1  11 MGHRFHPTDREVL-KYLVGFVRNEPLPLQNElMQVVDLYADkEPWQIFEaydrGNNNNNNTRYFITPQKKEKPTWKRVSRTVGKGTWKLQNKGRD 104
                     79*********99.9**********99977758888*997559****642442222344466********************************* PP

             NAM  92 vlskkgelvglkktLvfy.kgrapkgektdWvmheyrl 128
                     v++ kg+l+g  k+L +   +++++ ++ +W+m ey+l
  XP_009601217.1 105 VFDDKGRLMGYVKSLKYIpANKSSNNVNGEWLMTEYSL 142
                     ******************656888889*********97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019419.81E-289165IPR003441NAC domain
PROSITE profilePS5100527.419165IPR003441NAC domain
PfamPF023652.2E-1211142IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    Send to blast
MAENSSSHRS MGHRFHPTDR EVLKYLVGFV RNEPLPLQNE LMQVVDLYAD KEPWQIFEAY  60
DRGNNNNNNT RYFITPQKKE KPTWKRVSRT VGKGTWKLQN KGRDVFDDKG RLMGYVKSLK  120
YIPANKSSNN VNGEWLMTEY SLFDRYLVAR EIKNKGFVIC KIKKKGKPGD KKKGNNIEEV  180
VNDEKMREIE EFIKSVLQED VQVEDNGIRS NGIPEDDQEN NIIQYVEGDQ VRDHVLGLLG  240
SPEDINMEYQ VEDHQHATLW ASAEDVDLDT INFC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A9e-111214218140Stress-induced transcription factor NAC1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018626406.11e-174PREDICTED: NAC domain-containing protein 41-like
RefseqXP_019238684.11e-174PREDICTED: NAC domain-containing protein 30-like
TrEMBLA0A1S4CTL31e-154A0A1S4CTL3_TOBAC; NAC domain-containing protein 41-like
STRINGXP_009601217.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA10241385
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62380.16e-15NAC-domain protein 101