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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_009601217.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | NAC | ||||||||
Protein Properties | Length: 274aa MW: 31844.8 Da PI: 5.7326 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 76.7 | 5.4e-24 | 11 | 142 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykv.ePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 +G rFhPtd e++ +yL v++++l+l++ ++ vd+y ePw++ + +++++ yf ++++k+++t kr +r++ +g+Wk + k ++ XP_009601217.1 11 MGHRFHPTDREVL-KYLVGFVRNEPLPLQNElMQVVDLYADkEPWQIFEaydrGNNNNNNTRYFITPQKKEKPTWKRVSRTVGKGTWKLQNKGRD 104 79*********99.9**********99977758888*997559****642442222344466********************************* PP NAM 92 vlskkgelvglkktLvfy.kgrapkgektdWvmheyrl 128 v++ kg+l+g k+L + +++++ ++ +W+m ey+l XP_009601217.1 105 VFDDKGRLMGYVKSLKYIpANKSSNNVNGEWLMTEYSL 142 ******************656888889*********97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 9.81E-28 | 9 | 165 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 27.41 | 9 | 165 | IPR003441 | NAC domain |
Pfam | PF02365 | 2.2E-12 | 11 | 142 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 274 aa Download sequence Send to blast |
MAENSSSHRS MGHRFHPTDR EVLKYLVGFV RNEPLPLQNE LMQVVDLYAD KEPWQIFEAY 60 DRGNNNNNNT RYFITPQKKE KPTWKRVSRT VGKGTWKLQN KGRDVFDDKG RLMGYVKSLK 120 YIPANKSSNN VNGEWLMTEY SLFDRYLVAR EIKNKGFVIC KIKKKGKPGD KKKGNNIEEV 180 VNDEKMREIE EFIKSVLQED VQVEDNGIRS NGIPEDDQEN NIIQYVEGDQ VRDHVLGLLG 240 SPEDINMEYQ VEDHQHATLW ASAEDVDLDT INFC |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 9e-11 | 12 | 142 | 18 | 140 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_018626406.1 | 1e-174 | PREDICTED: NAC domain-containing protein 41-like | ||||
Refseq | XP_019238684.1 | 1e-174 | PREDICTED: NAC domain-containing protein 30-like | ||||
TrEMBL | A0A1S4CTL3 | 1e-154 | A0A1S4CTL3_TOBAC; NAC domain-containing protein 41-like | ||||
STRING | XP_009601217.1 | 0.0 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1024 | 13 | 85 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G62380.1 | 6e-15 | NAC-domain protein 101 |