 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
XP_009600900.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
| Family |
WRKY |
| Protein Properties |
Length: 366aa MW: 40215.8 Da PI: 10.1334 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_009600900.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 96.9 | 1.3e-30 | 293 | 350 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
D ++WrKYGqK++kgs++pr+YY+C+s gCp++k+ver+ +dp+v+++tYegeH+h+
XP_009600900.1 293 DDFSWRKYGQKPIKGSPHPRGYYKCSSIrGCPARKHVERALDDPNVLIVTYEGEHDHP 350
99***********************9988****************************7 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 366 aa
Download sequence Send
to blast |
MAVDLMTTGY RNNNTYTSKI EENAMQEAAA GLQSVEKLIR LLSQSQNLSQ KQKQSFQDPS 60
IKSNSTIDFS PDYLAVADTA VNRFKKFISL LGRTRTGHAR FRRGPITTIS APVLPKVDKE 120
PELLCLPAPS QNRLVEEKLK TENPQAGSKI YCPTPIQRLP PLPLNNHQHQ LVKNGSTSER 180
KESTTTINFA TPSPANSFIS SLTGDTESLQ PSSMTSSGFQ ITNLSQVSSA GRPPLSTSSF 240
KRKCSSMDDL AVKCSSAGGS SGRCHCPKKR KSKVKRVVRI PAISMKMADI PPDDFSWRKY 300
GQKPIKGSPH PRGYYKCSSI RGCPARKHVE RALDDPNVLI VTYEGEHDHP FSITETPPAA 360
IVLESS
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By salicylic acid and strongly during leaf senescence. {ECO:0000269|PubMed:11449049, ECO:0000269|PubMed:11722756}. |
