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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_009599319.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family |
ARR-B |
Protein Properties |
Length: 657aa MW: 71545.2 Da PI: 6.3939 |
Description |
ARR-B family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_009599319.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | G2-like | 81.8 | 7.9e-26 | 209 | 265 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ...kYRl 55
kpr++W+ eLH++Fv+av+qL G++kA+Pk+ilelm+v+gLt+e+v+SHLQ k+Rl
XP_009599319.1 209 KPRVVWSVELHQQFVSAVNQL-GIDKAVPKRILELMNVPGLTRENVASHLQenqKFRL 265
79*******************.****************************73337776 PP
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2 | Response_reg | 76.9 | 7.1e-26 | 25 | 133 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS
Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93
vl+vdD+ + +++l+q+l+k +y +v+++++++ al+ll+e++ +D++l D+ mp+mdG++ll+ e++lp+i++++ g +++ + ++ G
XP_009599319.1 25 VLVVDDDIVCLRILEQMLRKCKY-SVTTCTQATVALNLLRERRgsFDVVLSDVHMPDMDGFKLLELVGL-EMDLPVIMMSGDGRTNLVMRGVQHG 117
89*********************.***************999999*******************87754.558********************** PP
ESEEEESS--HHHHHH CS
Response_reg 94 akdflsKpfdpeelvk 109
a d+l Kp+ eel +
XP_009599319.1 118 ACDYLIKPIRDEELKN 133
*************986 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0000160 | Biological Process | phosphorelay signal transduction system |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 657 aa
Download sequence Send
to blast |
MASMSGDGAT CKSEATDKFP VGLRVLVVDD DIVCLRILEQ MLRKCKYSVT TCTQATVALN 60 LLRERRGSFD VVLSDVHMPD MDGFKLLELV GLEMDLPVIM MSGDGRTNLV MRGVQHGACD 120 YLIKPIRDEE LKNIWQHVVR KKCSFSKEPE YSGSLDDNDR HKRGNDDSEC ASSVIEGADG 180 VLKPQKKKRD AKEEDETEME NDDPTTAKKP RVVWSVELHQ QFVSAVNQLG IDKAVPKRIL 240 ELMNVPGLTR ENVASHLQEN QKFRLYLKRL SGVAQQQGGF PSTYCGPIEQ NPKLGSLGRF 300 DIQALAASGQ IPPETLTALH AELLGRSTGN LVLPSVEQPD LLQASLQQAK CIPVDHVVAY 360 GQPLMKCPPS ISNPKLLSQP MMSAEDVHSG FGSWRAKNIC MVPSSNLTGL AAPDSNMLMA 420 MMQHQQQWQK QQQLEQQQKQ SGLSEANHSI NVKPSCLVLP YQSPDNFQVG DSSGSISQAC 480 SLSKSSIIDY SVLSPQSNNS SGVVQVLDRE LKPACGLNRL STAASFSPSV SSCSVHADNS 540 VGLQLHNSSL AFGASKQLPG FVTNHLGFPV SCNSKSSQIL DQGPTRNSGV GKAASIPSRF 600 AVDESDSPMC NFSTAKVYTE DTKVKQEANM NIMENAKVGP ALFQNFPSGD LMSVFSD
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator that binds specific DNA sequence. Functions as a response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. May directly activate some type-A response regulators in response to cytokinins. {ECO:0000250|UniProtKB:Q940D0}. |
UniProt | Transcriptional activator that binds specific DNA sequence. Functions as a response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. May directly activate some type-A response regulators in response to cytokinins. {ECO:0000250|UniProtKB:Q940D0}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | JF412541 | 0.0 | JF412541.1 Nicotiana tabacum RRB1 type-b response regulator mRNA, complete cds. |