PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_009598748.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | NAC | ||||||||
Protein Properties | Length: 265aa MW: 30602 Da PI: 4.4223 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 73 | 7.6e-23 | 8 | 138 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykv.ePwdLpkkvka..eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 p+G rFhPtd e++ +yL v++++l++++ ++++d+y ePw++ ++++ ++k yf ++++k+++t k r++++g Wk + k ev XP_009598748.1 8 PMGNRFHPTDREVL-KYLIGFVRDEPLPCQNElMQQTDLYADkEPWQIFEAYDDhgTNKTRYFITPQKKEKPTWKSVPRTVEKGAWKPQSKGLEV 101 89**********99.9**********9987766999**997559****7433332144467********************************** PP NAM 93 lskkgelvglkktLvfy.kgrapkgektdWvmheyrl 128 ++ kg+l+g k+L + +++p+ ++ +W+m ey+l XP_009598748.1 102 FDDKGRLMGFVKSLKYIpPNKSPNNVNGEWLMTEYSL 138 *****************66799999**********97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 5.36E-27 | 6 | 161 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 26.186 | 7 | 161 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.9E-11 | 8 | 138 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 265 aa Download sequence Send to blast |
MGCSSRCPMG NRFHPTDREV LKYLIGFVRD EPLPCQNELM QQTDLYADKE PWQIFEAYDD 60 HGTNKTRYFI TPQKKEKPTW KSVPRTVEKG AWKPQSKGLE VFDDKGRLMG FVKSLKYIPP 120 NKSPNNVNGE WLMTEYSLYD RYLGAREIKN KGFVVCKIKK KENPDDKKKG KTVVNDEIIR 180 DVEEFINSAL QEDNYGMWND ILVAMDDDQK NIEYIEGDEL GDQLLALLGS EDNAXXXXXX 240 EVEDDQLANL LDSADDIDLD AIEFI |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | EU753259 | 0.0 | EU753259.1 Nicotiana tabacum NAC transcription factor (NAC2) mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009598748.1 | 0.0 | PREDICTED: NAC domain-containing protein 53-like | ||||
TrEMBL | B3VK71 | 0.0 | B3VK71_TOBAC; NAC transcription factor | ||||
STRING | XP_009598748.1 | 0.0 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1024 | 13 | 85 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G62380.1 | 2e-12 | NAC-domain protein 101 |