PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009598748.1
Organism
Nicotiana tomentosiformis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 265aa    MW: 30602 Da    PI: 4.4223
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009598748.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM737.6e-2381382128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykv.ePwdLpkkvka..eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 
                     p+G rFhPtd e++ +yL   v++++l++++  ++++d+y   ePw++ ++++   ++k  yf ++++k+++t k   r++++g Wk + k  ev
  XP_009598748.1   8 PMGNRFHPTDREVL-KYLIGFVRDEPLPCQNElMQQTDLYADkEPWQIFEAYDDhgTNKTRYFITPQKKEKPTWKSVPRTVEKGAWKPQSKGLEV 101
                     89**********99.9**********9987766999**997559****7433332144467********************************** PP

             NAM  93 lskkgelvglkktLvfy.kgrapkgektdWvmheyrl 128
                     ++ kg+l+g  k+L +   +++p+ ++ +W+m ey+l
  XP_009598748.1 102 FDDKGRLMGFVKSLKYIpPNKSPNNVNGEWLMTEYSL 138
                     *****************66799999**********97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019415.36E-276161IPR003441NAC domain
PROSITE profilePS5100526.1867161IPR003441NAC domain
PfamPF023651.9E-118138IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    Send to blast
MGCSSRCPMG NRFHPTDREV LKYLIGFVRD EPLPCQNELM QQTDLYADKE PWQIFEAYDD  60
HGTNKTRYFI TPQKKEKPTW KSVPRTVEKG AWKPQSKGLE VFDDKGRLMG FVKSLKYIPP  120
NKSPNNVNGE WLMTEYSLYD RYLGAREIKN KGFVVCKIKK KENPDDKKKG KTVVNDEIIR  180
DVEEFINSAL QEDNYGMWND ILVAMDDDQK NIEYIEGDEL GDQLLALLGS EDNAXXXXXX  240
EVEDDQLANL LDSADDIDLD AIEFI
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU7532590.0EU753259.1 Nicotiana tabacum NAC transcription factor (NAC2) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009598748.10.0PREDICTED: NAC domain-containing protein 53-like
TrEMBLB3VK710.0B3VK71_TOBAC; NAC transcription factor
STRINGXP_009598748.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA10241385
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62380.12e-12NAC-domain protein 101