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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_009598687.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family |
NAC |
Protein Properties |
Length: 540aa MW: 62221 Da PI: 6.1311 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_009598687.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 178.3 | 2e-55 | 4 | 131 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93
lppGfrFhPtdeelv +yLk+k++g+k+el e+i+evd+yk+ePwdLp k + +++ ewyfFs+ ++ky++g+r+nratk+gyWkatgkd++v
XP_009598687.1 4 LPPGFRFHPTDEELVAYYLKRKINGRKIEL-EIIPEVDLYKCEPWDLPgKsLLPSKDLEWYFFSPCNRKYPNGSRTNRATKAGYWKATGKDRKVN 97
79****************************.99***************6434555777************************************* PP
NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128
s + ++vg+kktLv+y+grap+g +t+Wvmheyrl
XP_009598687.1 98 S-QMRAVGMKKTLVYYRGRAPHGARTHWVMHEYRL 131
*.9999***************************98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 540 aa
Download sequence Send
to blast |
MVSLPPGFRF HPTDEELVAY YLKRKINGRK IELEIIPEVD LYKCEPWDLP GKSLLPSKDL 60 EWYFFSPCNR KYPNGSRTNR ATKAGYWKAT GKDRKVNSQM RAVGMKKTLV YYRGRAPHGA 120 RTHWVMHEYR LDERECEVAN GLQDGYALCR IFKKSLNAPK VVDLYYDDNM ESSDYRRPTQ 180 GSPFHVAAAG PSDDNKWSQC LSSDEAFSFN STTPSIPNYG TLTYAPPKVN IALPPLEVHD 240 FPQAGYVNYS TILPQSSYNI NQNTNQTDIV QQILSVTQAS QDHVNEDSFG GNYTQVADDF 300 SFLPHNDNQI HDLGSFNFDE DFKSDRIVEN LRWIGMSDMD LEKAFLEDYK TVPIDNVSGV 360 LKEEYELEGD TSGHNSSFNE FIKKTEDFSS EFGNDFEVYE KIEVNHRMFI ATQQAAKTFY 420 HQVVPSTTVT VHRNLVKSDL VKIPQNTPFF DCFLRKKLLI TRPWLGAVST LVGVIALLHA 480 FWIYFSLCLE NEGSIEENME RNEKKKKGQD CQWSCKEKKW PYFTLVLAFS TIWLHFLNSY
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3D Structure ? help Back to Top |
 |
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 5e-54 | 2 | 160 | 15 | 171 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 5e-54 | 2 | 160 | 15 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 5e-54 | 2 | 160 | 15 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 5e-54 | 2 | 160 | 15 | 171 | NO APICAL MERISTEM PROTEIN |
3swm_A | 6e-54 | 2 | 160 | 18 | 174 | NAC domain-containing protein 19 |
3swm_B | 6e-54 | 2 | 160 | 18 | 174 | NAC domain-containing protein 19 |
3swm_C | 6e-54 | 2 | 160 | 18 | 174 | NAC domain-containing protein 19 |
3swm_D | 6e-54 | 2 | 160 | 18 | 174 | NAC domain-containing protein 19 |
3swp_A | 6e-54 | 2 | 160 | 18 | 174 | NAC domain-containing protein 19 |
3swp_B | 6e-54 | 2 | 160 | 18 | 174 | NAC domain-containing protein 19 |
3swp_C | 6e-54 | 2 | 160 | 18 | 174 | NAC domain-containing protein 19 |
3swp_D | 6e-54 | 2 | 160 | 18 | 174 | NAC domain-containing protein 19 |
4dul_A | 5e-54 | 2 | 160 | 15 | 171 | NAC domain-containing protein 19 |
4dul_B | 5e-54 | 2 | 160 | 15 | 171 | NAC domain-containing protein 19 |
Search in ModeBase |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | HG975441 | 2e-36 | HG975441.1 Solanum pennellii chromosome ch02, complete genome. |