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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_009598426.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family |
GATA |
Protein Properties |
Length: 343aa MW: 37439 Da PI: 6.2586 |
Description |
GATA family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_009598426.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GATA | 57.2 | 2.3e-18 | 243 | 276 | 1 | 34 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34
C++C tkTp+WR gp g+ktLCnaCG++y++ +
XP_009598426.1 243 CQHCEITKTPQWRAGPMGPKTLCNACGVRYKSGR 276
*******************************987 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0008270 | Molecular Function | zinc ion binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 343 aa
Download sequence Send
to blast |
MGSNLVDEID CGSFFDHIDD LIEFPLENEG AGLSSTDCKD FPTIWNDPLP DSDSLFSGSH 60 RNSASDFSAE LSVPYEDIVQ LEWLSAFVED SFSGGGLTLG KDNFPLNKET SEAKFQTSSP 120 VSVLESSSSC SSSSCSVEKT VPLSSPCHRG PQRARSKRPR PATFNPAPAI QLISPTSSFT 180 EIPQPFVAPK ITSESENFAE SPMKKILKPA VAEQKTKKKL KLSFPSSLVK TNQNPVAQTI 240 RKCQHCEITK TPQWRAGPMG PKTLCNACGV RYKSGRLFPE YRPAASPTFV PAIHSNSHKK 300 VIEMRTKVVP DNNATIARTA PPATVTQPEF NPSNEDSVEE ENK
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AB107689 | 0.0 | AB107689.1 Nicotiana tabacum AGP1 mRNA for AG-motif binding protein-1, complete cds. |