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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
XP_009598343.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
| Family |
TALE |
| Protein Properties |
Length: 366aa MW: 41624.3 Da PI: 6.3068 |
| Description |
TALE family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_009598343.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 28.4 | 2.8e-09 | 293 | 327 | 21 | 55 |
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS
Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRake 55
k +yps++e+ LA+ +gL+++q+ +WF N+R ++
XP_009598343.1 293 KWPYPSESEKVALAETTGLDQKQINNWFINQRKRH 327
669*****************************885 PP
|
| 2 | ELK | 37.9 | 3.8e-13 | 247 | 268 | 1 | 22 |
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22
ELK++LlrKYsgyL+sLkqE+s
XP_009598343.1 247 ELKNHLLRKYSGYLSSLKQELS 268
9*******************97 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0001708 | Biological Process | cell fate specification |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0010051 | Biological Process | xylem and phloem pattern formation |
| GO:0010089 | Biological Process | xylem development |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 366 aa
Download sequence Send
to blast |
MENNYNQLGE NSSQRGNNFL YGGIPLLSSP NSSIYGRTSG GGGGGDCYDQ SQAVVHPIVK 60
TEGGSSTSHH HHTFQYPSII RSGYHHQTVQ NHHESESSGS EVDALKAKII AHPQCSNLLD 120
AYMDCQKVGA PPEVVARLSA VRQEFEVRQR DSSTDRDVSK DPELDQFMEA YYDMLVKYRE 180
ELTRPLHEAM DFMRKIETQL NMLGNGPVRI FNSEDKCEGV GSSEEEQDNS GGETEIPEID 240
PRAEDRELKN HLLRKYSGYL SSLKQELSKK KKKGKLPKDA RQKLLSWWEL HYKWPYPSES 300
EKVALAETTG LDQKQINNWF INQRKRHWKP SEDMQFMVMD GLHPQNAAAL YMEGHYMGEG 360
PFRLGQ
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| Functional Description ? help
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| Source |
Description |
| UniProt | Appears to be involved in meristem formation and in the regulation of leaf morphology. Misexpression makes the leaf more compound which is always associated with growth retardation and loss of apical dominance, resulting in dwarfed, bushy plants. Probably binds to the DNA sequence 5'-TGAC-3'. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | JQ686931 | 0.0 | JQ686931.1 Nicotiana tabacum cultivar SR1 Knotted 1 (KNAT1) mRNA, complete cds. |
