 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
XP_009597703.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
| Family |
WRKY |
| Protein Properties |
Length: 321aa MW: 36330.1 Da PI: 5.1161 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_009597703.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 75.6 | 6.2e-24 | 113 | 174 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59
+dDg++WrKYGqK++ s++pr+Y+rCt++ +C+++k+v++ +++p ++ +tY g+H+++
XP_009597703.1 113 VDDGHAWRKYGQKQILHSTYPRHYFRCTHKydqKCQATKQVQKIQDNPLLFRTTYYGNHTCK 174
59***************************99999**************************97 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009862 | Biological Process | systemic acquired resistance, salicylic acid mediated signaling pathway |
| GO:0009864 | Biological Process | induced systemic resistance, jasmonic acid mediated signaling pathway |
| GO:0010200 | Biological Process | response to chitin |
| GO:0045892 | Biological Process | negative regulation of transcription, DNA-templated |
| GO:0050832 | Biological Process | defense response to fungus |
| GO:1900056 | Biological Process | negative regulation of leaf senescence |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 321 aa
Download sequence Send
to blast |
MESPLPEKSS ADLKRAIDGL IRGQEFTRQL KEIIKKPLAT IMAEDLVGKI MNSFSETLSV 60
INSGESNEDT AEVKSPEDSS GSCKSTTSLK DRRGCYKRRK TSETNTKESS DLVDDGHAWR 120
KYGQKQILHS TYPRHYFRCT HKYDQKCQAT KQVQKIQDNP LLFRTTYYGN HTCKPFPRVS 180
QIILDTPIDG DSSILLSFDQ NNNNNYSSLQ NVNHNYQPYN IPTFPSIKEE TKEEVFQRSC 240
TFYPKIEDQN QSSNSDYFLP ANDDHLSTPA AFEASGGNMA AALSPDVISS GVYSSCTTST 300
DNLEIDFDFE ECLWNFEGYN S
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor involved in senescence, biotic and abiotic stress responses by modulating various phytohormones signaling pathways (By similarity). Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). Required for the resistance (R) gene Mi-1-mediated resistance to potato aphid (e.g. M.euphorbiae) and root-knot nematode (e.g. M.javanica) (PubMed:21898085). {ECO:0000250|UniProtKB:Q9LY00, ECO:0000250|UniProtKB:Q9SUP6, ECO:0000269|PubMed:21898085}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced in response to potato aphid (e.g. M.euphorbiae) infestation and root-knot nematode (e.g. M.javanica) inoculation. Up-regulated by salicylic acid (SA) and suppressed by methyl jasmonate (MeJA). {ECO:0000269|PubMed:21898085}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | EU056918 | 9e-96 | EU056918.1 Solanum tuberosum WRKY transcription factor 6 mRNA, complete cds. |
