PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_009597400.1

Organism

Nicotiana tomentosiformis

Taxonomic ID

4098

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

VOZ

Protein Properties

Length: 477aa MW: 53267.2 Da PI: 5.8624

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_009597400.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	410.6	3.1e-126	198	417	1	217
VOZ 1 pppsaflgpkcalwdctrpaqgsewl...qdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwna 92 pp saflgpkcalwdc+rpa gs+w+ qdycs +ha+la neg +g pv+rp gi+lkd+llf+al ak++gk+vg+pecegaatakspwna XP_009597400.1 198 PPASAFLGPKCALWDCPRPAMGSDWCqksQDYCSDYHASLAPNEGYLGRPPVVRPMGIGLKDNLLFQALGAKAHGKDVGVPECEGAATAKSPWNA 292 789********************944459************************************************************ PP VOZ 93 aelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlel 187 +elfdl+++egetirewlffdkprrafesgnrkqrslpdy+grgwhesrkq+m+efgglkrsyymdpqp++++ewhlyeyein++da+alyrlel XP_009597400.1 293 PELFDLKVVEGETIREWLFFDKPRRAFESGNRKQRSLPDYNGRGWHESRKQMMNEFGGLKRSYYMDPQPMKNLEWHLYEYEINKYDACALYRLEL 387 ******************************************************************************************* PP VOZ 188 klvdekksakgkvskdsladlqkklgrlta 217 klvd+kk +kgkv++ s++dlqk++grlta XP_009597400.1 388 KLVDGKKIPKGKVTNVSVSDLQKQMGRLTA 417 **************************97 PP

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0009408	Biological Process	response to heat
GO:0009414	Biological Process	response to water deprivation
GO:0009631	Biological Process	cold acclimation
GO:0009816	Biological Process	defense response to bacterium, incompatible interaction
GO:0045893	Biological Process	positive regulation of transcription, DNA-templated
GO:0048578	Biological Process	positive regulation of long-day photoperiodism, flowering
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 477 aa Download sequence Send to blast
MRKLSKRGAC KSASHQLFKD RAKNRVDDLQ GVLTNLQSAR KESRSYDVGL LEEQVHQMLR 60 EWKAELNEPS PASSLQGGSL VSSSDIYRLL LGEEEDDATS ALAAPKPEPD AQKVSVTDFQ 120 EGFNATQVLH EQGFQLVDQC KGLPSVVNSA GINNLGIATQ LDYHSFDLHQ EYDQQYLPGF 180 DALNLCLEDA LPPIHISPPA SAFLGPKCAL WDCPRPAMGS DWCQKSQDYC SDYHASLAPN 240 EGYLGRPPVV RPMGIGLKDN LLFQALGAKA HGKDVGVPEC EGAATAKSPW NAPELFDLKV 300 VEGETIREWL FFDKPRRAFE SGNRKQRSLP DYNGRGWHES RKQMMNEFGG LKRSYYMDPQ 360 PMKNLEWHLY EYEINKYDAC ALYRLELKLV DGKKIPKGKV TNVSVSDLQK QMGRLTAEFP 420 LDNKRTVKGR SKAASLKNVG NIQAAPIPMV LTCEGFDYGT GESYDYLVDD LDGYFIT

Sequence ? help Back to Top

Protein Sequence Length: 477 aa Download sequence Send to blast

MRKLSKRGAC KSASHQLFKD RAKNRVDDLQ GVLTNLQSAR KESRSYDVGL LEEQVHQMLR  60
EWKAELNEPS PASSLQGGSL VSSSDIYRLL LGEEEDDATS ALAAPKPEPD AQKVSVTDFQ  120
EGFNATQVLH EQGFQLVDQC KGLPSVVNSA GINNLGIATQ LDYHSFDLHQ EYDQQYLPGF  180
DALNLCLEDA LPPIHISPPA SAFLGPKCAL WDCPRPAMGS DWCQKSQDYC SDYHASLAPN  240
EGYLGRPPVV RPMGIGLKDN LLFQALGAKA HGKDVGVPEC EGAATAKSPW NAPELFDLKV  300
VEGETIREWL FFDKPRRAFE SGNRKQRSLP DYNGRGWHES RKQMMNEFGG LKRSYYMDPQ  360
PMKNLEWHLY EYEINKYDAC ALYRLELKLV DGKKIPKGKV TNVSVSDLQK QMGRLTAEFP  420
LDNKRTVKGR SKAASLKNVG NIQAAPIPMV LTCEGFDYGT GESYDYLVDD LDGYFIT

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	BT014516	0.0	BT014516.1 Lycopersicon esculentum clone 133906R, mRNA sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009597399.1	0.0	PREDICTED: transcription factor VOZ1-like isoform X2
Swissprot	Q9SGQ0	0.0	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	A0A1S3WXY3	0.0	A0A1S3WXY3_TOBAC; transcription factor VOZ1-like
STRING	XP_009597399.1	0.0	(Nicotiana tomentosiformis)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	0.0	vascular plant one zinc finger protein

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]