 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
XP_009597132.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
| Family |
NAC |
| Protein Properties |
Length: 245aa MW: 28516.4 Da PI: 9.3091 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_009597132.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 149.8 | 1.3e-46 | 14 | 138 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95
lppGfrF+Pt+ee+v +yL +k+ + +l++ ++i+e++i+k++PwdLp + e++ yfFs+++ ky++g+r+nrat+sgyWk tg dk+++++
XP_009597132.1 14 LPPGFRFQPTEEEIVFQYLIRKTFSCPLPA-SIIPEINICKHDPWDLPGDI---EQDRYFFSNKEAKYRNGNRSNRATSSGYWKPTGLDKQITCS 104
79****************************.89***************554...5689***********************************98 PP
NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128
++ g+kktLvfykg+++++++tdW+mheyrl
XP_009597132.1 105 kRKPILGMKKTLVFYKGKSSHASRTDWIMHEYRL 138
345559**************************98 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 245 aa
Download sequence Send
to blast |
MDKFNFVKDG AIKLPPGFRF QPTEEEIVFQ YLIRKTFSCP LPASIIPEIN ICKHDPWDLP 60
GDIEQDRYFF SNKEAKYRNG NRSNRATSSG YWKPTGLDKQ ITCSKRKPIL GMKKTLVFYK 120
GKSSHASRTD WIMHEYRLVL PKTQPFNFHH FKKSSQSSMV QIGNWVLCHI FMKKRNGKCD 180
QEEYKADHQH IQIPKQTLYY DFMREDLSDR AISSCSSSLS NDDSSEVSSN PSRLIEQEEA 240
SNRAL
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 1e-42 | 12 | 174 | 15 | 166 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 1e-42 | 12 | 174 | 15 | 166 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 1e-42 | 12 | 174 | 15 | 166 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 1e-42 | 12 | 174 | 15 | 166 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 1e-42 | 12 | 178 | 18 | 173 | NAC domain-containing protein 19 |
| 3swm_B | 1e-42 | 12 | 178 | 18 | 173 | NAC domain-containing protein 19 |
| 3swm_C | 1e-42 | 12 | 178 | 18 | 173 | NAC domain-containing protein 19 |
| 3swm_D | 1e-42 | 12 | 178 | 18 | 173 | NAC domain-containing protein 19 |
| 3swp_A | 1e-42 | 12 | 178 | 18 | 173 | NAC domain-containing protein 19 |
| 3swp_B | 1e-42 | 12 | 178 | 18 | 173 | NAC domain-containing protein 19 |
| 3swp_C | 1e-42 | 12 | 178 | 18 | 173 | NAC domain-containing protein 19 |
| 3swp_D | 1e-42 | 12 | 178 | 18 | 173 | NAC domain-containing protein 19 |
| 4dul_A | 1e-42 | 12 | 174 | 15 | 166 | NAC domain-containing protein 19 |
| 4dul_B | 1e-42 | 12 | 174 | 15 | 166 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcriptional repressor that negatively regulates the expression of genes involved in xylem vessel formation. Represses the transcriptional activation activity of NAC030/VND7, which regulates protoxylem vessel differentiation by promoting immature xylem vessel-specific genes expression (PubMed:20388856). Transcriptional activator that regulates the COLD-REGULATED (COR15A and COR15B) and RESPONSIVE TO DEHYDRATION (LTI78/RD29A and LTI65/RD29B) genes by binding directly to their promoters. Mediates signaling crosstalk between salt stress response and leaf aging process (PubMed:21673078). May play a role in DNA replication of mungbean yellow mosaic virus (PubMed:24442717). {ECO:0000269|PubMed:20388856, ECO:0000269|PubMed:21673078, ECO:0000269|PubMed:24442717}. |
| Regulation -- Description ? help
Back to Top |
| Source |
Description |
| UniProt | INDUCTION: By abscisic acid (ABA) and salt stress. {ECO:0000269|PubMed:21673078}. |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | HG975515 | 3e-64 | HG975515.1 Solanum lycopersicum chromosome ch03, complete genome. |
