PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009597084.1
Organism
Nicotiana tomentosiformis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 460aa    MW: 51892.4 Da    PI: 4.3617
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009597084.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM63.85.1e-20161503128
             NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiy.kvePwdLp.kkvkaeekew.yfFskrdkkyatgkrknr.atksgyWkatgkdkevl 93 
                      G+rF+Ptdeel+  +L k v+ k++++ ++i+   +y + +Pwd+  +++ +e++++ yfF+k ++++a g r +r  +  g Wk   k k+v+
  XP_009597084.1  16 IGIRFRPTDEELI-LFLLKFVSCKNFSC-DHIRVEALYgNKKPWDIFeNNFLGEDTKVnYFFTKLKRTKAGGLRFSRgLIGGGSWKGLDKRKPVF 108
                     69***********.89999*********.6777777662569****6445555555445******************999*************** PP

             NAM  94 skkgelvglkktLvfy........kgrapkgektdWvmheyrl 128
                     + +++lvg kk++ +          g ++  ++  W m+ey+l
  XP_009597084.1 109 K-GSKLVGFKKSFRYQeedscteeLGGDRGIKNIVWNMKEYSL 150
                     9.9*************5554443325555556889******97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019419.42E-2310177IPR003441NAC domain
PROSITE profilePS5100523.79214177IPR003441NAC domain
PfamPF023656.5E-1216150IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 460 aa     Download sequence    Send to blast
MMSSKTSHNN SPYPVIGIRF RPTDEELILF LLKFVSCKNF SCDHIRVEAL YGNKKPWDIF  60
ENNFLGEDTK VNYFFTKLKR TKAGGLRFSR GLIGGGSWKG LDKRKPVFKG SKLVGFKKSF  120
RYQEEDSCTE ELGGDRGIKN IVWNMKEYSL NDDILKVLRQ RNSIQYEDFV LCCIKRKSVH  180
VNDHKELGNM MPMEIAASGN NVVDVMNDML STAPEHDLDY VTSSSEDQGT DFHDFCPSNQ  240
FSSSEHNNVF DQLQQDQNIE QLVNVQAQNI EEMAPSAQSH VDYVGSSSSE EGTVSSNQFT  300
YSPDNNDFEL QQDHNIECDD RATVPSTLAE IMKNIDHVDR KVYEYIGSLL AEKSNTAEPQ  360
LPDESMAQGS STAMVNEENI NAGFVSDQWS IEQVHNIEER APITFTGMLS SSDYYAETST  420
TASVINSDEC FTMEELLASD DDVIAADLSW PSLEDHLQTS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016488024.10.0PREDICTED: NAC domain-containing protein 68-like
TrEMBLA0A1S4BGP00.0A0A1S4BGP0_TOBAC; NAC domain-containing protein 68-like
STRINGXP_009597084.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA10426625
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.12e-16NAC domain containing protein 2