 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
XP_009597076.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
| Family |
MYB |
| Protein Properties |
Length: 350aa MW: 39951.9 Da PI: 8.8537 |
| Description |
MYB family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_009597076.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 50.2 | 6.1e-16 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g+WT+eEd +l+ +++++G g+W++ +++ + R++k+c++rw +yl
XP_009597076.1 14 KGPWTPEEDRKLLSCIEEHGCGSWRALPAKADLQRCGKSCRLRWINYL 61
79********************************************97 PP
|
| 2 | Myb_DNA-binding | 47.6 | 3.8e-15 | 67 | 110 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
rg+++ +E+ +++++++lG++ W++Ia++++ Rt++++k++w++
XP_009597076.1 67 RGKFSLQEERTIIQLHALLGNR-WSAIAAYLP-SRTDNEIKNYWNS 110
89********************.*********.***********96 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 350 aa
Download sequence Send
to blast |
MGRSKCCDKQ GLKKGPWTPE EDRKLLSCIE EHGCGSWRAL PAKADLQRCG KSCRLRWINY 60
LRPDIKRGKF SLQEERTIIQ LHALLGNRWS AIAAYLPSRT DNEIKNYWNS RLKKRLTKMG 120
IDPMTHKPKI TNNINGSSND QSKYVANLSH MAEWESARLE AEARLVRRSK DHSKFLFNNT 180
RNNNNNNNNX NNYVVSQPYY QLPCLDILKA WQRASTKLPT TNDIRSILLD GFANKNLESS 240
IPSTLNSSGN LFMNNVPCIT KVGDQNLPLS TITCLENPCP TKDVQTDLPS FMQEFSELFD 300
PEYTQNSTNN FNGIQVDNFM GSCSGDFEDN KFNWNNFPYL VTSPIGSPVF
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Functions as a repressor of epidermal cell outgrowth and negatively regulate trichome branch formation (PubMed:18805951, PubMed:21070410). Acts as both a positive and negative regulator of cellular outgrowth. Promotes both trichome expansion and branch formation (PubMed:21070410). Coordinately with WIN1/SHN1, participates in the regulation of cuticle biosynthesis and wax accumulation in reproductive organs and trichomes. Functions in cuticle nanoridge formation in petals and stamens, and in morphogenesis of petal conical cells and trichomes (PubMed:23709630). May play a role in the regulation of cuticle formation in vegetative organs (PubMed:24169067). {ECO:0000269|PubMed:18805951, ECO:0000269|PubMed:21070410, ECO:0000269|PubMed:23709630, ECO:0000269|PubMed:24169067}. |
