PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009596001.1
Organism
Nicotiana tomentosiformis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bZIP
Protein Properties Length: 371aa    MW: 41904.2 Da    PI: 9.3675
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009596001.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_123.89.6e-082442901763
                     HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1  17 ArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                     A+rsR RK+++i eLe+ v++L+ae ++   ele l++++  l +e+
  XP_009596001.1 244 AQRSRVRKLQYISELERNVQALQAEGSEVSAELEFLNQQSLILSMEN 290
                     89************************************998888777 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003380.0019233292IPR004827Basic-leucine zipper domain
CDDcd147037.60E-16235282No hitNo description
SuperFamilySSF579591.27E-5244286No hitNo description
Gene3DG3DSA:1.20.5.1706.2E-5244283No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 371 aa     Download sequence    Send to blast
MANSKGASSM RNMVYNGKSS LLPPKSPFPS ISPSYVDYVP SSAVTQKGIS KSRDGSHHQR  60
TSSESCLIEE QPSWLDDLLN EPETPVRRGG HRRSSSDSFT YHDAANIANL DYIAQDDNKF  120
RNLTPVPSWG SQDFDYYKDA RHATFHVDQN FSNRQKNRAR DASPNAIQHP RGRPPFRENV  180
KTHSLGASCP PQEGERPKSA GSDKQDLVES VSPNPVGSGE KKDSSHSKSS ASESDTKRAK  240
QQFAQRSRVR KLQYISELER NVQALQAEGS EVSAELEFLN QQSLILSMEN KALKQRLENL  300
AQEQLIKYLE HEVLEKERGR LRALYQQQQL PQSQQQQQSS SSHRRTTSRD LDQQFADLSL  360
KHKEGFGQLH M
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754490.0HG975449.1 Solanum pennellii chromosome ch10, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009596001.10.0PREDICTED: uncharacterized protein At4g06598-like
RefseqXP_009596002.10.0PREDICTED: uncharacterized protein At4g06598-like
RefseqXP_009596004.10.0PREDICTED: uncharacterized protein At4g06598-like
RefseqXP_018624986.10.0PREDICTED: uncharacterized protein At4g06598-like
TrEMBLA0A1J6I8230.0A0A1J6I823_NICAT; Uncharacterized protein
STRINGXP_009596001.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA27651733
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G58110.21e-85bZIP family protein