 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
XP_009594403.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
| Family |
bHLH |
| Protein Properties |
Length: 285aa MW: 31426.4 Da PI: 4.5573 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_009594403.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 13 | 0.0002 | 161 | 207 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+ +rrR ri ++++ L el P + kK a+ +++++Ik+Lq
XP_009594403.1 161 RAALSDRRRKMRIAERIDALGELFPCS-----KKGGRASLMDEVIDHIKNLQ 207
556779********************9.....7888899999********99 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 285 aa
Download sequence Send
to blast |
MGEQSQPNAL ETQWAFLGGT NDSYYLAGHE LNKQCMAGVG IDGMHYVSVP SPQWIHDQQT 60
PQNYVEYLAE NVVSEVQVDA SAEASGFRLV DSSADIISQE QIRYPSPYFE GVPLDFLIGS 120
ESQVGALTWE PAGDARLASG PCSEALAAGS SYLSKSSRKA RAALSDRRRK MRIAERIDAL 180
GELFPCSKKG GRASLMDEVI DHIKNLQFQI KDLSWSRLGG EPSSIPFLFV EGCGHYILDE 240
QLIEPLEETL GKLLEVNPSM TTQLLENKGL FFMPMTLAEG MHHHE
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | HG975448 | 5e-91 | HG975448.1 Solanum pennellii chromosome ch09, complete genome. |
