PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009593639.1
Organism
Nicotiana tomentosiformis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bZIP
Protein Properties Length: 305aa    MW: 34614.6 Da    PI: 5.2798
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009593639.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.15.8e-11178222549
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49 
                     kr +r   NR +A+rsR RK++++ eLe+ v +L+ae + L  ++
  XP_009593639.1 178 KRIKRILANRQSAQRSRVRKLQYVSELERSVSTLQAEVSVLSPRV 222
                     899*********************************988776655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.9E-14174238IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.634176239IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1703.2E-11178230No hitNo description
SuperFamilySSF579592.57E-11178232No hitNo description
PfamPF001701.5E-9178222IPR004827Basic-leucine zipper domain
CDDcd147031.16E-21179229No hitNo description
PROSITE patternPS000360181196IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    Send to blast
MAQLPPRVPN MTPNWPDFSL QKMDNLSPNA TAANNNPLWA DEFLDFSTKR GSHRRSMSDS  60
IAFLETPMVE ECRRLSSTPG SGGTSTGNEE FERFDDEQQI MSMFNDDEHD NMSCSNPSSP  120
SDYINVNDDN KRMIVGGGDR DQMQQLNEEV QSSCKTTEEP TATHASVEYS CEKVVDPKRI  180
KRILANRQSA QRSRVRKLQY VSELERSVST LQAEVSVLSP RVAFLDHQRL VLNVDNSALR  240
QRIAALAQDK LFKDAHQEAL KREIERLRQI YYQQNLKQME NGTQSKSQPP VADSSAIEMK  300
VQLVN
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator. {ECO:0000269|PubMed:17719007}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754511e-39HG975451.1 Solanum pennellii chromosome ch12, complete genome.
GenBankHG9755241e-39HG975524.1 Solanum lycopersicum chromosome ch12, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009593639.10.0PREDICTED: basic leucine zipper 61-like
RefseqXP_018624287.10.0PREDICTED: basic leucine zipper 61-like
SwissprotQ9M2K41e-104BZP61_ARATH; Basic leucine zipper 61
TrEMBLA0A314LE490.0A0A314LE49_NICAT; Basic leucine zipper 61
STRINGXP_009593639.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA17752465
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58120.11e-105bZIP family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Gibalová A, et al.
    Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte.
    Plant Reprod, 2017. 30(1): p. 1-17
    [PMID:27896439]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]