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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_009592889.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family |
HD-ZIP |
Protein Properties |
Length: 272aa MW: 30464.2 Da PI: 8.5716 |
Description |
HD-ZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_009592889.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 57.9 | 1.7e-18 | 128 | 182 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
rk+ ++tk q Lee F+++++++ ++++eLA++l+L rqV vWFqNrRa+ k
XP_009592889.1 128 RKKLRLTKAQSALLEESFKQHSTLNPKQKQELARNLNLRPRQVEVWFQNRRARTK 182
788899***********************************************98 PP
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2 | HD-ZIP_I/II | 124.2 | 6.1e-40 | 128 | 216 | 1 | 90 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90
+kk+rl+k q++lLEesF+++++L+p++K+elar+L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lk+++++l+een+rL+ke +eL+ +
XP_009592889.1 128 RKKLRLTKAQSALLEESFKQHSTLNPKQKQELARNLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTEENRRLHKELQELK-A 216
69*************************************************************************************9.4 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0009735 | Biological Process | response to cytokinin |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 272 aa
Download sequence Send
to blast |
MGSFDDISST GLVLGLGFST TADQKSTKIA PVVLDKGPSL SFEPSLRLSL SGDHTYEKQE 60 AVKKVNNVTR GPNDHQSVDL YRQDSAASSY SNASVKRERD VGSEETTTEV ERLSSRVSDE 120 DDDGSNARKK LRLTKAQSAL LEESFKQHST LNPKQKQELA RNLNLRPRQV EVWFQNRRAR 180 TKLKQTEVDC EFLKKCCETL TEENRRLHKE LQELKAVKIA QPLYMQLPAA TLTMCPSCER 240 IGGVGENPSK NPFTLAQKPY FYNSFTNPSA AC
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 176 | 184 | RRARTKLKQ |
Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor. {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | EU998971 | 0.0 | EU998971.1 Nicotiana benthamiana homeodomain leucine-zipper 1 (HB1) mRNA, complete cds. |