 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
XP_009592416.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
| Family |
bHLH |
| Protein Properties |
Length: 331aa MW: 37741.7 Da PI: 8.1995 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_009592416.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 28.3 | 3.1e-09 | 188 | 235 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+h+ +Er RR++i +++ L++++P + +k Ka +L + ++Y++sLq
XP_009592416.1 188 SHSLAERARREKISKKMKYLQDIVPGC----NKVTGKAGMLDEIINYVQSLQ 235
8*************************9....677*****************9 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009299 | Biological Process | mRNA transcription |
| GO:0009735 | Biological Process | response to cytokinin |
| GO:0009826 | Biological Process | unidimensional cell growth |
| GO:0043425 | Molecular Function | bHLH transcription factor binding |
| GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
| GO:0046983 | Molecular Function | protein dimerization activity |
| Sequence ? help Back to Top |
| Protein Sequence Length: 331 aa
Download sequence Send
to blast |
MLSCGEMSVL ERQRAVLERL YSQSKQQLSS LPLQNFAQFN NLITGQMMGS LDVPIERMNE 60
NFTNFDMFGR EHDKGITGFG FTNNWQETAR PSFSTVSNSS ITTVSPPPEK EIDTIVAPRR 120
NAVSTKKRKT EQFPEEEDCK IKRPQSEISE KSQRAASGNN SKENSKTSEV QKPDYIHVRA 180
RRGQATDSHS LAERARREKI SKKMKYLQDI VPGCNKVTGK AGMLDEIINY VQSLQKQVEF 240
LSMKLAVLNP RLDLNTDNFF TKDFPSYMSN FPTVDIPTLS EYSLIQHQQM LPQRRENCLM 300
SFPEAASSPI AVVQQQPNFE TDLQSLFQCQ F
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Atypical bHLH transcription factor that acts as positive regulator of cell elongation downstream of multiple external and endogenous signals by direct binding to the promoters and activation of the two expansin genes EXPA1 and EXPA8, encoding cell wall loosening enzymes. Transcriptional activity is inhibited when binding to the bHLH transcription factor IBH1. {ECO:0000269|PubMed:23221598}. |
