PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009592395.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bHLH
Protein Properties Length: 243aa    MW: 27047.6 Da    PI: 5.8301
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009592395.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.56.5e-053785153
                    CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHH CS
             HLH  1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIks 53
                    +r+ + erE+  R+++N+ f  L   l  +     + + Ka+iL ++ +++k+
  XP_009592395.1 37 KRVHKAEREKLKREHLNELFLDLANALELS----EQTNGKASILNETARFVKD 85
                    79999**********************998....68899999****9999887 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.105.0E-734108IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.13E-43497No hitNo description
SuperFamilySSF474595.37E-1134106IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088810.7793686IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    Send to blast
MGAESPTSSA ENGGIAVETS SPNGSPPSKK IQKKVPKRVH KAEREKLKRE HLNELFLDLA  60
NALELSEQTN GKASILNETA RFVKDMISQI KQLKRENTAL LSESQYLSME KKELQDDNSA  120
LEAQIDKLEG EVKERVAKTN LDLNLSLTET QLPQLASQVT DNFLQLPGSE HPFQQMQMMN  180
SLYVVPLNST PQAYPEPDAA KPAAMPTYSV KKPQARYPTP ADVWPSQILE KRPQLGQEVQ  240
NSL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009592394.11e-177PREDICTED: transcription factor bHLH47-like
TrEMBLA0A1S3YWE91e-165A0A1S3YWE9_TOBAC; transcription factor bHLH47-like
STRINGXP_009592394.11e-176(Nicotiana tomentosiformis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47640.37e-45bHLH family protein