 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
XP_009591685.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 327aa MW: 37077 Da PI: 4.8317 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_009591685.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 59.8 | 4.5e-19 | 93 | 146 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
k++++t++q++ Le+ F +++++ e++ +LAk+lgL+ rq+ +WFqNrRa++k
XP_009591685.1 93 KKRRLTENQVQFLEKSFGEENKLEPERKVQLAKELGLQPRQIAIWFQNRRARWK 146
56689************************************************9 PP
|
| 2 | HD-ZIP_I/II | 129.4 | 1.4e-41 | 92 | 183 | 1 | 92 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92
ekkrrl+++qv++LE+sF ee+kLeperKv+la+eLglqprq+a+WFqnrRAR+ktkqlEk+yeaL+++yd+lk++ ++L ke+e+Lr+e+
XP_009591685.1 92 EKKRRLTENQVQFLEKSFGEENKLEPERKVQLAKELGLQPRQIAIWFQNRRARWKTKQLEKEYEALRNQYDNLKSDYNNLLKEKENLRAEVF 183
69**************************************************************************************9985 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 327 aa
Download sequence Send
to blast |
MMAPGMLYSA GACASNFDGV LIQKQRVMSS SSSTAKEHLG SLFVPGCSSS YLGSSSMVSF 60
GSVNGGKRSF FDSFDQEENE ADELGEYFHQ AEKKRRLTEN QVQFLEKSFG EENKLEPERK 120
VQLAKELGLQ PRQIAIWFQN RRARWKTKQL EKEYEALRNQ YDNLKSDYNN LLKEKENLRA 180
EVFQLNDKLL LNEKENGQLT QRDFQKHSDS SPKETMADPI SRVKMSNVSA RVLKEDLSSA 240
KSDVLGSESP HYTDGVHSSF VKQGDSYVVE PEPSDLSQDD EENFNKTMLS TANLLAKAED 300
DDYRVTSSNV SYFGFPVEDQ GFGFWSY
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 140 | 148 | RRARWKTKQ |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | HG975442 | 1e-122 | HG975442.1 Solanum pennellii chromosome ch03, complete genome. |
