 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
XP_009591124.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
| Family |
WRKY |
| Protein Properties |
Length: 508aa MW: 55959.8 Da PI: 6.4202 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_009591124.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 95.9 | 2.9e-30 | 234 | 293 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
++Dg++WrKYGqK kg+++pr+YYrCt a gCpv+k+v+r+ ed +++++tYeg+Hnh+
XP_009591124.1 234 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApGCPVRKQVQRCLEDMSILITTYEGTHNHP 293
58***************************99****************************7 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 508 aa
Download sequence Send
to blast |
MENNKSEGDE MEIDLSLKLD SREEEIEPLN EENQSSEVNA KTQGKDQELS KAETSGSSKT 60
EELSMLQMEM NKMKEENKFL RKAVEQTMKD YYDLQAKFTT IHQNNHEKDH RNFLSLSGND 120
DITEGLTRSP KILDIKNRTL SQTSQELDDI MDGDQLGLSL TLVSSNSSTT ASRLVESTEE 180
ERKEKIKEDN AAITTQIQNK GNFQGGLTSH VTTASPPNRK ARVSVRARCE SATMNDGCQW 240
RKYGQKIAKG NPCPRAYYRC TVAPGCPVRK QVQRCLEDMS ILITTYEGTH NHPLPVGATA 300
MASTTSAAAS FMLVDSSINP LLNGNINQAV NFPNYHNHAP NYSHHIPNSS SSPSPYFSNL 360
RNNILNSSDP NIVLDLTKNI SNDHHHQFPF VSSSSNSSAT ATTNQLGQYS WMAKLPSNNY 420
DGNSSTIVNN LFTGPKLLGD HHHQNSSSNP ILAENMSVIA SDPKFRVAVA AAISSLINKD 480
QNHPISTAMP SSLGDRGDSN GGSVRHSQ
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced by potassium deprivation. {ECO:0000269|PubMed:15173595}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | HG975440 | 3e-53 | HG975440.1 Solanum pennellii chromosome ch01, complete genome. |
| GenBank | HG975513 | 3e-53 | HG975513.1 Solanum lycopersicum chromosome ch01, complete genome. |
