 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
XP_009590526.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
| Family |
WRKY |
| Protein Properties |
Length: 315aa MW: 35133.9 Da PI: 6.6244 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_009590526.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 99.1 | 2.8e-31 | 156 | 214 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
+D ++WrKYGqK++kgs++pr+YY+C+++ gC ++k+ver+++dp++++itY+ eHnh+
XP_009590526.1 156 SDMWSWRKYGQKPIKGSPYPRGYYKCSTSkGCLARKQVERNRSDPNMFIITYTAEHNHP 214
79************************9988****************************8 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 315 aa
Download sequence Send
to blast |
MEEDWDLHAV VRSCTAANSA TTTTTSSSGS GSATISSCNF QPRLDDSNSF SFQDLYFDPR 60
FTTQNTAFEE LHELCKPFFN ESLLQKSPLI SPQRLLQDLP LQQQQFNQLN TKLIQPIKRP 120
LSSVNGAALH AQSPRSKRRK NQMKKICQVA ADALSSDMWS WRKYGQKPIK GSPYPRGYYK 180
CSTSKGCLAR KQVERNRSDP NMFIITYTAE HNHPMPTHRN SLAGISRHNK ETNSNKTTSS 240
SPVSSPVTNS PALENQESSR DEKEDIFEDE NDDFFEGLEE LESPAAGDSL PENFPGTLQF 300
PWLVNNAATT AAGGS
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription factor involved in the expression of defense genes in innate immune response of plants. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. Activates WRKY 29, SIRK and its own promoters. {ECO:0000269|PubMed:11875555}. |
| Regulation -- Description ? help
Back to Top |
| Source |
Description |
| UniProt | INDUCTION: Induced after flagellin treatment. {ECO:0000269|PubMed:11875555}. |
| Publications
? help Back to Top |
- Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
BMC Plant Biol., 2013. 13: p. 229
[PMID:24377444] - Coego A, et al.
The TRANSPLANTA collection of Arabidopsis lines: a resource for functional analysis of transcription factors based on their conditional overexpression.
Plant J., 2014. 77(6): p. 944-53
[PMID:24456507] - Gkizi D, et al.
The Innate Immune Signaling System as a Regulator of Disease Resistance and Induced Systemic Resistance Activity Against Verticillium dahliae.
Mol. Plant Microbe Interact., 2016. 29(4): p. 313-23
[PMID:26780421] - Kloth KJ, et al.
AtWRKY22 promotes susceptibility to aphids and modulates salicylic acid and jasmonic acid signalling.
J. Exp. Bot., 2016. 67(11): p. 3383-96
[PMID:27107291] - Camborde L, et al.
Detection of nucleic acid-protein interactions in plant leaves using fluorescence lifetime imaging microscopy.
Nat Protoc, 2017. 12(9): p. 1933-1950
[PMID:28837131] - Wang S, et al.
Bacillus cereus AR156 Activates Defense Responses to Pseudomonas syringae pv. tomato in Arabidopsis thaliana Similarly to flg22.
Mol. Plant Microbe Interact., 2018. 31(3): p. 311-322
[PMID:29090631]
|
