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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
XP_009590020.1 |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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| Family |
bZIP |
| Protein Properties |
Length: 339aa MW: 37241 Da PI: 5.0799 |
| Description |
bZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_009590020.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | bZIP_1 | 49 | 1.3e-15 | 159 | 214 | 3 | 58 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58
++kr+rr ++NRe+ArrsR+RK+a ++ Le+ v++ +eN++L k+l +++++
XP_009590020.1 159 DIKRTRRQASNRESARRSRRRKQAHLADLENQVDQYRGENESLFKQLADATQQYKD 214
58******************************************888877777765 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0071333 | Biological Process | cellular response to glucose stimulus |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0042803 | Molecular Function | protein homodimerization activity |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| GO:0046982 | Molecular Function | protein heterodimerization activity |
| Sequence ? help Back to Top |
| Protein Sequence Length: 339 aa
Download sequence Send
to blast |
MEKKMANFAN IRDMKKSPSL LAFEEYFKTG DGFGGSDHHQ NTNNNNINDD DNNNNNVHAD 60
IFGDICSVAP SFNQEMVNGF SNCALTDKPL WSPNLTPKQS SISATVDSQS SICAGSPTPT 120
IMPKMKESQV MGATSGSYSD DDDVDAEVGP CEQSTDPLDI KRTRRQASNR ESARRSRRRK 180
QAHLADLENQ VDQYRGENES LFKQLADATQ QYKDALTNNR VLKSDVEALR AKVKLAEDMV 240
ARGSLTSTSL SHLLQNYLNT PQPLGTNNNN LCRLDNVSPT ITVPGEDAWS AISGQNPVIG 300
VENVNAFNRN FRNGGAMSDT VSCVSDVWSW ESHVPSISK
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| Nucleic Localization
Signal ? help
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| No. |
Start |
End |
Sequence |
| 1 | 173 | 180 | RRSRRRKQ |
| 2 | 175 | 180 | SRRRKQ |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor that binds to the DNA specific sequence 5'-TGAGTCA-3' found in seed storage protein gene promoters. {ECO:0000269|PubMed:11133985}. |
| Publications
? help Back to Top |
- Onodera Y,Suzuki A,Wu CY,Washida H,Takaiwa F
A rice functional transcriptional activator, RISBZ1, responsible for endosperm-specific expression of storage protein genes through GCN4 motif.
J. Biol. Chem., 2001. 276(17): p. 14139-52
[PMID:11133985] - Kikuchi S, et al.
Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
Science, 2003. 301(5631): p. 376-9
[PMID:12869764]
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