PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009589882.1
Organism
Nicotiana tomentosiformis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bZIP
Protein Properties Length: 371aa    MW: 41950.4 Da    PI: 9.231
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009589882.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_124.46.4e-082442831756
                     HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1  17 ArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 
                     A+rsR RK+++i eLe+ v++L+ae ++   ele l++++
  XP_009589882.1 244 AQRSRVRKLQYISELERNVQVLQAEGSEVSAELEFLNQQS 283
                     789******************************9999876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003380.0026233292IPR004827Basic-leucine zipper domain
CDDcd147034.97E-16237282No hitNo description
SuperFamilySSF579598.44E-6244286No hitNo description
Gene3DG3DSA:1.20.5.1709.2E-5244282No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 371 aa     Download sequence    Send to blast
MANSKGPSSM RHMMYNGKSS LLPPKSPFPS TCPSYVDYPP SSAVTQKGIS KCRDGSHHQR  60
TSSESCLIEE QPSWLDDLLN EPETPVRRGG HRRSSSDSFT YFDAANIANL DYIAQDDNKF  120
RNITPVASWG SQDFDYYKDA RHATFHVDRN SSNQQKSRSR DASPNAKPHL RGFPPSRENV  180
KTQSLGSSFL PQEGEGPKSA GSDKQDLLES VTPDPKGSGE KKDSSHSKSS ASENDMKRAK  240
QQFAQRSRVR KLQYISELER NVQVLQAEGS EVSAELEFLN QQSLILSMEN KALKQRLENL  300
AQEQMIKYLE HEVLERERGR LRALYQQQQL PQSQQQQQSS SSRRRSTSRD LDQQFANICL  360
KHKDGSGQLH M
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754490.0HG975449.1 Solanum pennellii chromosome ch10, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009589882.10.0PREDICTED: uncharacterized protein At4g06598-like
RefseqXP_018623236.10.0PREDICTED: uncharacterized protein At4g06598-like
TrEMBLA0A1S3Y2M60.0A0A1S3Y2M6_TOBAC; uncharacterized protein At4g06598-like isoform X3
STRINGXP_009589882.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA27651733
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G58110.28e-71bZIP family protein