PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_009589729.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | NAC | ||||||||
Protein Properties | Length: 164aa MW: 19161.1 Da PI: 6.8872 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 59 | 1.7e-18 | 7 | 121 | 14 | 128 |
NAM 14 lvveyLkkkvegkkleleevikevdiykvePwdL.pkkvka.eekewyfFskrdkkyatgkrknratksgyWkatgk.dkevlskkgelvglkkt 105 l+ + L++k ++++l++ + + ++i+++ P+d+ p ++++ + ke+y ++r++ y r+nr +++gyWk + ++l + +vg+k+ XP_009589729.1 7 LI-QQLNNKFKNQPLSI-DGLIFANINDFSPQDFfPGEINGgGIKECYVLTPRRRLYGIMPRPNRRARNGYWKLLKCiNDNILG-PDGAVGMKQK 98 44.56999999999999.667788*********955666553667****************************65542777777.7778****** PP NAM 106 LvfykgrapkgektdWvmheyrl 128 L f++g++++g+kt+W+m ey+l XP_009589729.1 99 LFFFEGEQNHGRKTHWCMIEYKL 121 *********************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 22.297 | 1 | 148 | IPR003441 | NAC domain |
Pfam | PF02365 | 8.1E-8 | 10 | 121 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 3.27E-21 | 11 | 146 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 164 aa Download sequence Send to blast |
MVLDSFLIQQ LNNKFKNQPL SIDGLIFANI NDFSPQDFFP GEINGGGIKE CYVLTPRRRL 60 YGIMPRPNRR ARNGYWKLLK CINDNILGPD GAVGMKQKLF FFEGEQNHGR KTHWCMIEYK 120 LRQHCCSIDC DHNIGKLDDW VLCKVYEEYD PEMLSFQMET MDIG |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 3e-17 | 4 | 146 | 26 | 166 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009589729.1 | 1e-121 | PREDICTED: NAC domain-containing protein 72-like | ||||
TrEMBL | A0A1S3ZXD4 | 1e-106 | A0A1S3ZXD4_TOBAC; NAC domain-containing protein 72-like | ||||
STRING | XP_009589729.1 | 1e-120 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA17709 | 3 | 4 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G27410.2 | 1e-22 | NAC family protein |