PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_009589282.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | Nin-like | ||||||||
Protein Properties | Length: 193aa MW: 21874.1 Da PI: 8.597 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 39.3 | 1.3e-12 | 30 | 70 | 4 | 44 |
RWP-RK 4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRW 44 +isl dl+++F ++ +dAA +Lgv++++ Kr CR +G++ W XP_009589282.1 30 RISLGDLQQQFGKKRNDAAESLGVSPSTFKRCCRANGLAKW 70 699************************************** PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51519 | 9.943 | 13 | 101 | IPR003035 | RWP-RK domain |
Pfam | PF02042 | 1.6E-12 | 31 | 70 | IPR003035 | RWP-RK domain |
SuperFamily | SSF54277 | 1.57E-15 | 90 | 179 | No hit | No description |
Gene3D | G3DSA:3.10.20.240 | 5.1E-14 | 97 | 179 | No hit | No description |
Pfam | PF00564 | 2.3E-13 | 100 | 180 | IPR000270 | PB1 domain |
SMART | SM00666 | 8.1E-12 | 100 | 182 | IPR000270 | PB1 domain |
PROSITE profile | PS51745 | 14.35 | 100 | 177 | IPR000270 | PB1 domain |
CDD | cd05992 | 2.14E-16 | 103 | 179 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0005515 | Molecular Function | protein binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 193 aa Download sequence Send to blast |
MQIVHVNETT VLHQNYLRPR GKSKEKDYCR ISLGDLQQQF GKKRNDAAES LGVSPSTFKR 60 CCRANGLAKW SCKLKVQPHT TPTLTQRVVE SMATFQSDNT MSLKVSYNGV NVRFPLILSS 120 GKNDLEAEVE TRFGIQIGSF SIMYEDEDKD WILITCDLDL HHGMHILKNK GITTMKINLV 180 NQIECDRIPN SNA |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009589282.1 | 1e-145 | PREDICTED: protein NLP3-like | ||||
Refseq | XP_016494410.1 | 1e-142 | PREDICTED: protein NLP5-like isoform X1 | ||||
TrEMBL | A0A1S4BZT1 | 1e-140 | A0A1S4BZT1_TOBAC; protein NLP5-like isoform X1 | ||||
STRING | XP_009589282.1 | 1e-144 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA18197 | 3 | 4 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35270.1 | 3e-11 | Nin-like family protein |