 |
Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_009588506.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
Family |
B3 |
Protein Properties |
Length: 172aa MW: 19354.6 Da PI: 10.4938 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_009588506.1 | genome | NCBI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 40.3 | 5.8e-13 | 20 | 73 | 43 | 97 |
S-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEEE CS
B3 43 grsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkvf 97
sW+vk+ + +++ ++t+GW Fv++n+Lk+g ++ F+++++ s+ +l+v+ f
XP_009588506.1 20 KGSWSVKC--KFGQQYAFFTSGWTTFVEENHLKVGNVCAFEYIKNpSSVRLKVSHF 73
479*****..88888899**************************999999988766 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 172 aa
Download sequence Send
to blast |
MAFARKYWQN DSFLKLWRGK GSWSVKCKFG QQYAFFTSGW TTFVEENHLK VGNVCAFEYI 60 KNPSSVRLKV SHFGGEDISS HRPLTKVSMA PFYVGSPLTM DGSYLRLHVL GKGSWRVNGV 120 ALVSLALFGA FVSRAETSTV YILTPKVFTG LIVGVMLPYW ISAMTMKRVL SF
|
3D Structure ? help Back to Top |
 |
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
6afw_A | 2e-18 | 110 | 171 | 539 | 599 | Pyrophosphate-energized vacuolar membrane proton pump |
6afw_B | 2e-18 | 110 | 171 | 539 | 599 | Pyrophosphate-energized vacuolar membrane proton pump |
6afx_A | 2e-18 | 110 | 171 | 539 | 599 | Pyrophosphate-energized vacuolar membrane proton pump |
6afx_B | 2e-18 | 110 | 171 | 539 | 599 | Pyrophosphate-energized vacuolar membrane proton pump |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | HG975518 | 2e-43 | HG975518.1 Solanum lycopersicum chromosome ch06, complete genome. |