 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
XP_009588142.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
Family |
B3 |
Protein Properties |
Length: 326aa MW: 36787.5 Da PI: 7.7173 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_009588142.1 | genome | NCBI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 103.8 | 9.4e-33 | 62 | 167 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88
f+k ltpsdv+k++rlv+pk++ae+h + + e+++ l +ede g+ W+++++y+++s++yvltkGW++Fvk+++L++gDfv+F++++ +
XP_009588142.1 62 FEKPLTPSDVGKLNRLVIPKQHAEKHfplngtqNDSGEKGFLLNFEDELGKLWTFRYSYWNSSQSYVLTKGWSRFVKEKKLDAGDFVLFERHRLD 156
99***************************999844445899*************************************************75448 PP
EE..EEEEE-S CS
B3 89 efelvvkvfrk 99
+ + +++++r+
XP_009588142.1 157 GDRTFIGWRRR 167
88899999998 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 326 aa
Download sequence Send
to blast |
MSINHCSSQL TEPFWCTTKQ HYIMESTRKS SSPTYKNQTT PTSLCPNSNR LEENEIPKER 60 LFEKPLTPSD VGKLNRLVIP KQHAEKHFPL NGTQNDSGEK GFLLNFEDEL GKLWTFRYSY 120 WNSSQSYVLT KGWSRFVKEK KLDAGDFVLF ERHRLDGDRT FIGWRRRNAA AGATVLEQES 180 GIAPPGGGGG GWGQVYYGGS GHPYPSAGVP YQPDCLHAVR RTMHNQTAAN GNNTRRQVRL 240 FGVNLAECEV DESLWSEPST SDGSSTPSHH QQSHEYQGQA GQLHYQYQVH CSNPSAPASS 300 HAKNNHHNNM DVDYSSDMNH MRYHQG
|
3D Structure ? help Back to Top |
 |
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
5os9_A | 2e-46 | 58 | 167 | 4 | 113 | B3 domain-containing transcription factor NGA1 |
5os9_B | 2e-46 | 58 | 167 | 4 | 113 | B3 domain-containing transcription factor NGA1 |
Search in ModeBase |