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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_009587632.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family |
NAC |
Protein Properties |
Length: 290aa MW: 33087.4 Da PI: 9.2026 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_009587632.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 108 | 1.1e-33 | 58 | 198 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk......sg 81
lp+G++F+P+d+el+ e+L++kv+ + ++++ + ++ +i++++P++Lp v+++ +fF++ +k+y+tg+rk+r+++ +
XP_009587632.1 58 LPAGVKFDPSDQELL-EHLEAKVRLDAqklhplIDEFIHtLEGEnGICYTHPEKLP-GVSQDGLIRHFFHRPSKAYTTGTRKRRKVHtdiegnET 150
799************.99****998875565442222222443346**********.555555677******************74444555588 PP
NAM 82 yWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
+W++tgk+++v++ kg+++g kk+Lv+y g+++k+ekt+Wvmh+y+l
XP_009587632.1 151 RWHKTGKTRPVVV-KGKVKGHKKILVLYtnYGKQRKPEKTNWVMHQYHL 198
8************.999***********6657999999*********98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 290 aa
Download sequence Send
to blast |
MFLTKEMICI NDSANEQSIP TNVNNESPKN TTKTRTCPSC GHLIKSEEKA GIHNLPGLPA 60 GVKFDPSDQE LLEHLEAKVR LDAQKLHPLI DEFIHTLEGE NGICYTHPEK LPGVSQDGLI 120 RHFFHRPSKA YTTGTRKRRK VHTDIEGNET RWHKTGKTRP VVVKGKVKGH KKILVLYTNY 180 GKQRKPEKTN WVMHQYHLGD NEDEKEGELV VSKVFYQTQP RQCGNSLLRN NCPPPAVRAN 240 IGQASQFRDN TTFVQCFNNP TLISFDQYEH NNRSTPRLPN FNLPDTTFIP
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator that plays a regulatory role in the development of secondary cell wall fibers (PubMed:18952777,PubMed:22133261). Involved in the regulation of cellulose and hemicellulose biosynthetic genes as well as of genes involved in lignin polymerization and signaling (PubMed:22133261). Is not a direct target of SND1 (PubMed:18952777). {ECO:0000269|PubMed:18952777, ECO:0000269|PubMed:22133261}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | HG975446 | 1e-108 | HG975446.1 Solanum pennellii chromosome ch07, complete genome. |