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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_009587628.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family |
WOX |
Protein Properties |
Length: 383aa MW: 43372.2 Da PI: 7.6493 |
Description |
WOX family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_009587628.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 69.7 | 3.6e-22 | 80 | 139 | 3 | 57 |
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
+R+++t+eql++Leel+++ +r+psae++++++++l +++ ++V++WFqN++a+e++
XP_009587628.1 80 SRWNPTPEQLQTLEELYRRgTRTPSAEQIQHITAQLrrygKIEGKNVFYWFQNHKARERQ 139
7*****************99**************************************97 PP
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2 | Wus_type_Homeobox | 115.5 | 2.6e-37 | 79 | 141 | 3 | 65 |
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
++RW+PtpeQ++ Leely++G+rtP++e+iq+ita+L++yGkie+kNVfyWFQN+kaRerqk+
XP_009587628.1 79 SSRWNPTPEQLQTLEELYRRGTRTPSAEQIQHITAQLRRYGKIEGKNVFYWFQNHKARERQKR 141
79***********************************************************95 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 383 aa
Download sequence Send
to blast |
MWMMGYNDGG DFNMQDSFNG RKLRPLMPRV PHLPTANIST NPTCLRSIHG ENFIALNHHQ 60 LAMSEQNKRD FNTQQLVVSS RWNPTPEQLQ TLEELYRRGT RTPSAEQIQH ITAQLRRYGK 120 IEGKNVFYWF QNHKARERQK RRRQLESAAA AAGGDDQSRS ICNAENTGRK ESGANRTGFE 180 IEQTKNWPSP TNCSTLAEKT VATTKAAGVA ECRIAAERWI PLDEGEQRRS LLLADQRNAT 240 WQMMHLSCSP PTSTTPHHHL MNINSSTASI SNTITTPIIC SSSPSTPRTT MEPKQLFKTK 300 DHLNIFIAPF RTENNKHENI ENNLGDVGQE ESQTLELFPL RSSNDDNNLS EKDEVEISGA 360 DANSNSNFSG SHYQFFEFLP LKN
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | JF276253 | 0.0 | JF276253.1 Nicotiana sylvestris STENOFOLIA 1 (STF1) mRNA, complete cds. |