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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
XP_009587116.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
| Family |
SRS |
| Protein Properties |
Length: 355aa MW: 38681.7 Da PI: 6.9085 |
| Description |
SRS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_009587116.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF702 | 219.2 | 9.1e-68 | 125 | 278 | 3 | 154 |
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasa....aeaaskrkrelkskkqsalsstklss 93
g++sCqdCGnqakkdC+h+RCRtCCksrg++C+thvkstWvpaakrrerqqql+a+++++ +++ ++++ k kr+ + ++sal ++ l+s
XP_009587116.1 125 GGGISCQDCGNQAKKDCQHMRCRTCCKSRGLQCQTHVKSTWVPAAKRRERQQQLSALQQQERHDQlhldHNNNYKPKRKREDPSASALVCAPLPS 219
5789*****************************************************99999888888644444444444456667777777777 PP
DUF702 94 aeskkeletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154
++ + le+ ++P++vss+a+f+c+++ss++d+e++laYq+av+igGhvfkGiLydqG+e+
XP_009587116.1 220 NT--NGLEVGKFPAKVSSAALFQCIQMSSIEDAEDQLAYQAAVNIGGHVFKGILYDQGPES 278
65..569999*************************************************97 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 355 aa
Download sequence Send
to blast |
MANFFSLDGR GSSSQDQQQE ISSSHHRTVN PVPTEISAES WFLYRNDHNQ EMPTYKGFEL 60
WQSTTPQHQP EQQQQQQFRH PIYPLQDLYS TAVGLGVGPN QSGFDIFAGD HEASRSGFVM 120
MRSGGGGISC QDCGNQAKKD CQHMRCRTCC KSRGLQCQTH VKSTWVPAAK RRERQQQLSA 180
LQQQERHDQL HLDHNNNYKP KRKREDPSAS ALVCAPLPSN TNGLEVGKFP AKVSSAALFQ 240
CIQMSSIEDA EDQLAYQAAV NIGGHVFKGI LYDQGPESQY NNMAAAGDTS SGGGSGSAGI 300
PHHHNSAATA IASGGAAAAA EASNFLDPSL FPASLSTFMS TDYKQIWSVS NTSVL
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription activator involved in the transcriptional regulation of terpene biosynthesis in glandular trichomes (PubMed:24884371, PubMed:24142382). Binds to the promoter of the linalool synthase TPS5 and promotes TPS5 gene transactivation (PubMed:24884371, PubMed:24142382). Acts synergistically with MYC1 in the transactivation of TPS5 (PubMed:24884371). {ECO:0000269|PubMed:24142382, ECO:0000269|PubMed:24884371}. |
| Best hit in Arabidopsis thaliana ? help
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| Hit ID |
E-value |
Description |
| AT5G66350.1 | 5e-61 | Lateral root primordium (LRP) protein-related |
