 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
XP_009586993.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
| Family |
bHLH |
| Protein Properties |
Length: 417aa MW: 44674.4 Da PI: 8.1646 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_009586993.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 49.3 | 9e-16 | 231 | 276 | 5 | 55 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
hn+ Er+RRd+iN+++ +L++++P++ K +Ka++L +++eY+k+Lq
XP_009586993.1 231 HNQSERKRRDKINQRMKTLQKMVPNS-----SKTDKASMLDEVIEYLKQLQ 276
9************************8.....7******************9 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009567 | Biological Process | double fertilization forming a zygote and endosperm |
| GO:0009506 | Cellular Component | plasmodesma |
| GO:0046983 | Molecular Function | protein dimerization activity |
| Sequence ? help Back to Top |
| Protein Sequence Length: 417 aa
Download sequence Send
to blast |
MHGLGPPRVP NNKPISNYGG TLESIVNQGT RSVPHHHQKS ALDGSGHGGD EVVPWFNYHH 60
VVADTPLVPG SLTMAKDALV PCSANSNYHR RPPSSVQVPG LDGSTHVGSC SGATNNRDWM 120
AAPLVGTEPT HEGSSRADMS VSGSATCAGD SRQLTVDTYD REMGTGMYTS TSMGSPENTS 180
SDKQCTNRTG DDHDSVCHSR SKREVGDEED EKKGSKNSSS STKRKRAAAI HNQSERKRRD 240
KINQRMKTLQ KMVPNSSKTD KASMLDEVIE YLKQLQSQVN MMSRMNMSPA MMLPLAMQQQ 300
LQMSMMAAPM GMGMGMGMGM GMGMGVAGVL DINTLSRPNI TGLPPFLHPT AAAAAAFMQP 360
MTSWDGSTDR LNAAAVPDPL AALLACQSQP MTMDAYSRMA ALYQQFQQPA AGSGPKN
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 223 | 238 | RKRAAAIHNQSERKRR |
| 2 | 234 | 239 | ERKRRD |
| 3 | 235 | 240 | RKRRDK |
| Functional Description ? help
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| Source |
Description |
| UniProt | Required during the fertilization of ovules by pollen. {ECO:0000269|PubMed:15634699}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By cold treatment. {ECO:0000269|PubMed:12679534}. |
