PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009586992.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bHLH
Protein Properties Length: 445aa    MW: 47527.3 Da    PI: 5.8537
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009586992.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH15.33.7e-052823043355
                     .TTS-STCHHHHHHHHHHHHHHH CS
             HLH  33 apskKlsKaeiLekAveYIksLq 55 
                     ++s++ +Ka++L +++eY+k+Lq
  XP_009586992.1 282 NQSERTDKASMLDEVIEYLKQLQ 304
                     5899******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000830.00116281307No hitNo description
SuperFamilySSF474591.15E-6282330IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.4E-6282315IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009567Biological Processdouble fertilization forming a zygote and endosperm
GO:0009506Cellular Componentplasmodesma
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 445 aa     Download sequence    Send to blast
MNQCVPSWEL DDTPTPPKLP LQTQSNSLAP DVPSLDYEVA ELTWENGQLA MHGLGPPRVP  60
NNKPISNYGG TLESIVNQGT RSVPHHHQKS ALDGSGHGGD EVVPWFNYHH VVADTPLVPG  120
SLTMAKDALV PCSANSNYHR RPPSSVQVPG LDGSTHVGSC SGATNNRDWM AAPLVGTEPT  180
HEGSSRADMS VSGSATCAGD SRQLTVDTYD REMGTGMYTS TSMGSPENTS SDKQCTNRTG  240
DDHDSVCHSR SKREVGDEED EKKGSKNSSS STKRKRAAAI HNQSERTDKA SMLDEVIEYL  300
KQLQSQVNMM SRMNMSPAMM LPLAMQQQLQ MSMMAAPMGM GMGMGMGMGM GMGVAGVLDI  360
NTLSRPNITG LPPFLHPTAA AAAAFMQPMT SWDGSTDRLN AAAVPDPLAA LLACQSQPMT  420
MDAYSRMAAL YQQFQQPAAG SGPKN
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00034PBMTransfer from AT4G00050Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009586992.10.0PREDICTED: transcription factor UNE10 isoform X2
TrEMBLA0A1S4ALX70.0A0A1S4ALX7_TOBAC; transcription factor UNE10-like
STRINGXP_009586991.10.0(Nicotiana tomentosiformis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00050.11e-55bHLH family protein