 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
XP_009151462.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
|
| Family |
NAC |
| Protein Properties |
Length: 636aa MW: 71884.3 Da PI: 6.354 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_009151462.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 171.6 | 2.4e-53 | 14 | 141 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93
lp GfrF+Ptdeel+++yL+ k++g++le+ +vi+e+d++k+ePwdLp + +k++++ew+fF++rd+ky++g+r+nrat+ gyWkatgkd++++
XP_009151462.1 14 LPLGFRFRPTDEELINHYLRLKINGRDLEV-RVIPEIDVCKWEPWDLPglSVIKTDDQEWFFFCPRDRKYPSGHRSNRATDIGYWKATGKDRTIK 107
699***************************.99***************6448899999************************************* PP
NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128
s k+ +g+kktLvfy+grap+ge+t+W+mheyr+
XP_009151462.1 108 S-KKMIIGMKKTLVFYRGRAPRGERTNWIMHEYRA 141
*.9999***************************96 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 636 aa
Download sequence Send
to blast |
MATETQATLS MESLPLGFRF RPTDEELINH YLRLKINGRD LEVRVIPEID VCKWEPWDLP 60
GLSVIKTDDQ EWFFFCPRDR KYPSGHRSNR ATDIGYWKAT GKDRTIKSKK MIIGMKKTLV 120
FYRGRAPRGE RTNWIMHEYR ATDKDLDGTG PGQSPYVLCR LFHKPTDVAN CDEVENVNAT 180
PTTTRCSRED NSSEMVQETA TSRVHAQNIS DDTERCPSDK GSDVKPDAPV IKTENHGETS 240
RAKDRGKSIV EESPFARDFS SLYGPSFDQT SYTPVPSSIG FPASHVDSMY SSDFGNCQYG 300
LHFQDGASIQ DESLADVLDE VFHNHNQSST EPKDFALPKM MHWSFPRDTF GFVNGSAEAS 360
FPQFAPDVGA SGLVSDHYVD SKEAVEIQSS SGSSRTVTPL HSNVLGQHPP VSYATMDPFI 420
SNVNQREQEQ LPVDRNIILS EFNARARETQ TDLDFVVNQG TAPRRIRLQI EQPFTPVNNE 480
KGRDVDNHEE EEVQSAMTKI VEEDEKCFLD KDKSRAQGHA SLSESTNLNT QGTAHRRIRL 540
QTRIRKLPII PKNTGRDSNH SEEVAMHSKE KEDVSASSSS SSWQKQKLMR KRMVKCSSMV 600
IIMAVMVLLV GIWKESRDAK CSFLFHQLDS FKGMFT
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 3swm_A | 4e-47 | 1 | 166 | 7 | 170 | NAC domain-containing protein 19 |
| 3swm_B | 4e-47 | 1 | 166 | 7 | 170 | NAC domain-containing protein 19 |
| 3swm_C | 4e-47 | 1 | 166 | 7 | 170 | NAC domain-containing protein 19 |
| 3swm_D | 4e-47 | 1 | 166 | 7 | 170 | NAC domain-containing protein 19 |
| 3swp_A | 4e-47 | 1 | 166 | 7 | 170 | NAC domain-containing protein 19 |
| 3swp_B | 4e-47 | 1 | 166 | 7 | 170 | NAC domain-containing protein 19 |
| 3swp_C | 4e-47 | 1 | 166 | 7 | 170 | NAC domain-containing protein 19 |
| 3swp_D | 4e-47 | 1 | 166 | 7 | 170 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Expressed in roots, rosette leaves, cauline leaves, shoot apex, stems and flowers. {ECO:0000269|PubMed:17158162}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional activator activated by proteolytic cleavage through regulated intramembrane proteolysis (RIP). {ECO:0000250|UniProtKB:Q949N0}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By cold, heat and drought stresses. {ECO:0000269|PubMed:17158162}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | KF738269 | 0.0 | KF738269.1 Brassica napus NAC transcription factor 14 (NAC14.1) mRNA, complete cds. |
